| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0488 |
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| Symbol | |
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| ID | 4440384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 515046 |
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| End bp | 515852 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672346 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | YP_814324 |
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| Protein GI | 116629152 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00256644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAT TAATCGCCTT AGATACAGAC GGTACACTTT TAAATTCAGA AAATAAAATT
CTTCCCTCTA CTAAAACTGC AATCAAAAAA GCTTTAGATC AGGGAATCAA GGTCGTACTT
TGCTCTGGTC GACCAATCGC AGGTCTTGCA CATTTCATGA AAGAACTTGG AATTAAAGGC
AGCAATCAAT ATGCTGTAAC TTTAAATGGT GCAATAACTA GAAATGCGGA TGGCAAAATA
ATGACGCAAG ACCTTGTCAG CAATAAGCTT TACCGCGAGC TGACTAAATT TGCTAAAGAG
CAAAAAGTGC CTTTTAACAT TGTTGATCCA GACTCAAGAA TTATTACTGC AGATCATGAT
GTAGATTACT TTGAATTGCT GCAAGCCTGG GAGAATACGG CTCCACTGTT CATTAGAACT
CCTGATGAAA TGCCTAATGA CTTTCAGATT TCGAAAGGTT GTTTTGTTGG CGATAAAGCT
CTTCTTGATC AATTTGAACC AATATTAAGA GTAAAGTTTG GTCAAGATTT ATATATCGTT
CGTGCAGATG ACCATTTCTT AGAATGTTTA CATCCCAACG TAAATAAAGG GAGTGGTTTA
AAAGAATTAG GTAAAAAAAT TGGTATTAGT ACGGACGAAA TGATGGCTTT TGGGGATGAA
AGAAATGATA TTTCAATGTT CGATATTGTA GGAACCGCTG TGGCCATGGG CAACGGAAGT
CAAGAAGCAA AAGATCATGC AGACTTTGTT ACTGCATCAA ACAATGATAA CGGTATTGCC
AAGGCTTTAG ATAAGTTCGT TTTCTAA
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| Protein sequence | MIKLIALDTD GTLLNSENKI LPSTKTAIKK ALDQGIKVVL CSGRPIAGLA HFMKELGIKG
SNQYAVTLNG AITRNADGKI MTQDLVSNKL YRELTKFAKE QKVPFNIVDP DSRIITADHD
VDYFELLQAW ENTAPLFIRT PDEMPNDFQI SKGCFVGDKA LLDQFEPILR VKFGQDLYIV
RADDHFLECL HPNVNKGSGL KELGKKIGIS TDEMMAFGDE RNDISMFDIV GTAVAMGNGS
QEAKDHADFV TASNNDNGIA KALDKFVF
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