| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0397 |
|---|
| Symbol | |
|---|
| ID | 4440328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 412148 |
|---|
| End bp | 414430 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639672255 |
|---|
| Product | Beta-glucosidase-related glycosidase |
|---|
| Protein accession | YP_814240 |
|---|
| Protein GI | 116629068 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000000776871 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATTAATT ATCTAAAATC TATAGTGAAA AGGATAAATA TATCGAGGAT AAAAATGAAA
CAAGAGAAAA TATTTACATT ATTAAATGAA ATGTCACTAG ATGAAAAAAT TGGTCAATTG
ATTCAGCTAT CTGGAGAATT CTTTTCAGCC TCTGACATTT CTATTGGTCC GATTGAAAAA
TTGGGTATTT CTAAAAAAAT GGTTAATTTA TGTGGATCAG CATTAAATGT CGTAGGTGCG
GAAAATATTC GAAGAGTACA GGATCAACAA ATGCAGAAAC AACCTCATCA TATACCGATG
CTGTTTATGT CAGATGTTAT TTATGGCTTT AAAACCATCT TTCCGATTCC TTTAGGGTTA
GGAAGTTCAT GGGATCCAAA ATTAGTAAAA AGAGCATACT CTGTTGCTGC TGAAGAAGCA
TCAGCATCGG GTAATCAAGT AGCATTTGCA CCCATGGTAG ATGTTGTGCA TGATGCGAGA
TGGGGAAGGG TTTTAGAGTC GCCAGGTGAA GATCCGTATT TAAATTCTGT TTACTCTAAA
AATATGGTTG AAGGTTTACA AGAAAATCTC GCAAATAAAA CAGGTCAAGT ATCATGTATA
AAGCATTACG CTGCTTATGG AGCTGTAGAA GCTGGACGGG AATACAATCA AGTTGACATG
TCTTTAAGTA ATTTATATCA AAATTTCTTG CCACCTTATA AAGCTGGCGT AAAGGCTGGG
GCAGGAATGG TTATGACTGC ATTAACAACT TTAAATGGAG TGCCCTCTAC AGCAGATAAG
TGGTTGTTGT CAGATGTACT ACGTAAAAAA TGGAAATTCA ACGGTATTAT AATTTCTGAT
TATGCATCTA TTTATGAATT AATTAAACAT GGTTTTGCAC GAGATTCAAC TGATGCTGCT
TTAAAAGCTA TTGATGCAGG AGTAGATATC GATATGAAAT CTCCTTGTTA CGCAAATGGA
CTGCATGAGC TGGTGACGAA TGGAACACTA GATGAAGAAA AAATAAATAA TGCAGTTCTC
AAAGTGTTAA ATCTCAAAAA TCAATTAGGT CTATTTGAAA ACCCGTACTT TGGTGCTTCT
GTTGAAAAAG AAAAAAATAG TATACTTACT CCTCAAAAAC GTAAATTAGC ACGAAAATTA
GCTCAAGAAT CACTAGTTTT AATTCAAAAT AAAAATAATA TATTACCTCT GAAGAAAGAT
GCAAAAGTTG CTTTAATTGG TCCTTATGCC AATAGTCAAA AATTAATTGG TATGTGGGCA
ATTCATGGAA ATTCAAAAGA TACTGTAACA ATAGCTGATG GATTAAGACA ATATACTAAT
AATTTAACTG TAACTCATGG GACAGATTTG TGTCGTGATA AAGCACTATT AAAAAAGCTA
GGATTTTTGA CAGAGGAAGA CATTAATAAA ATTGTATCTT CACCAGAAAA AGAAAGGCTA
CATATTCAGA ATGCATTTAA GGCTGCAAAA GCAGCTGATA TTATAGTTTT GACATTAGGT
GAAGAAACAT ATGAAGCAGG AGAAGCTGGT GCTAAGACAA ACTTAAATAT TGCGCCAAAT
CAATTGAAAC TATTGGATAA ATTATCCCAA TTAAATAAAC CAATAATTTT AGTACTCATT
AGTGGGAGAC CATTGGTACT GACGAAAGTT AAAGATAAGG TCGATGCAAT ACTGGAAAGT
TGGTTTCCTG GTACTGAAGG TGGCAATGCA ATTGCGGATA TCCTATTTGG TAAGGTAAAT
CCTTCAGGAA GATTAACTAT GAGCTTTCCA TATGCTTCAG CTCAAGAGCC GTTATATTAC
AATCATTTGT CTACAGGAAG ACCAGAGAAT AACTCTCAGC ATGTCGGCAG ATTTGTATCT
AAGTATATTG ATGCATCAGC TAGAGCTTTA TATCCATTTG GCTATGGGCT TTCGTATGGA
AAAATAAAGT ATTCAAATTT AACTATTTCG TCTGAGCGAT TATTTTTGGA TAAGCCTGTA
AAAATTTCAT TAGATATTGA GAATTTAAGT GATTATGATC GGAAAGAAAC TGTCCAGTTA
TATATCCATC AAGAAACAGC TAGTATCGTT CAGCCAGTTA AGCGATTGAT AGATTTTACC
AAGATTGCCA TATCAGGTCA TTCAAGTCAA CATGTAGAAT TTTATATAAA TGCAAGTCAA
TTGTCATTTT ATGACAACAT TGGTAGGTCA CATAAAGAAA GTAGCAAAAT ACAGGTTTAC
GTTGGTACCA ATGGAGTACA GCTATTAAAA GGTAAATTTG ATTTTATAAA TAAGAGGTCA
TAA
|
|---|
| Protein sequence | MINYLKSIVK RINISRIKMK QEKIFTLLNE MSLDEKIGQL IQLSGEFFSA SDISIGPIEK
LGISKKMVNL CGSALNVVGA ENIRRVQDQQ MQKQPHHIPM LFMSDVIYGF KTIFPIPLGL
GSSWDPKLVK RAYSVAAEEA SASGNQVAFA PMVDVVHDAR WGRVLESPGE DPYLNSVYSK
NMVEGLQENL ANKTGQVSCI KHYAAYGAVE AGREYNQVDM SLSNLYQNFL PPYKAGVKAG
AGMVMTALTT LNGVPSTADK WLLSDVLRKK WKFNGIIISD YASIYELIKH GFARDSTDAA
LKAIDAGVDI DMKSPCYANG LHELVTNGTL DEEKINNAVL KVLNLKNQLG LFENPYFGAS
VEKEKNSILT PQKRKLARKL AQESLVLIQN KNNILPLKKD AKVALIGPYA NSQKLIGMWA
IHGNSKDTVT IADGLRQYTN NLTVTHGTDL CRDKALLKKL GFLTEEDINK IVSSPEKERL
HIQNAFKAAK AADIIVLTLG EETYEAGEAG AKTNLNIAPN QLKLLDKLSQ LNKPIILVLI
SGRPLVLTKV KDKVDAILES WFPGTEGGNA IADILFGKVN PSGRLTMSFP YASAQEPLYY
NHLSTGRPEN NSQHVGRFVS KYIDASARAL YPFGYGLSYG KIKYSNLTIS SERLFLDKPV
KISLDIENLS DYDRKETVQL YIHQETASIV QPVKRLIDFT KIAISGHSSQ HVEFYINASQ
LSFYDNIGRS HKESSKIQVY VGTNGVQLLK GKFDFINKRS
|
|---|
| |