| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0356 |
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| Symbol | rplK |
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| ID | 4440287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 379954 |
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| End bp | 380385 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639672214 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_814199 |
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| Protein GI | 116629027 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.000696128 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGACCGTGG CAAAGAAAGT TATTAACGTA GTTAAACTGC AAATTCCTGC TGGTGCAGCA
ACTCCTGCAC CTCCAGTTGG TCCTGCATTG GGTCAAGCTG GAATCAACAT CGTTGGTTTC
ACTAAGGACT TCAACGCACG TACTGCTGAT CAAAAGGGTA TGATTATCCC TGTAGTTATT
ACAGTATATG AAGATCGTTC ATTCGAATTC ATTACTAAGA CTCCACCAGC AGCTGTTCTT
TTGAAGAAGG CTGCCAAGGT TGACAAGGGT TCTGGTGAAC CTAACACTAA GAAGGTTGCT
AAGGTAACTA AGGACCAAGT TAAGGAAATT GCCGAAACCA AGATGAAAGA TCTAAACGCT
GCAGATGTTG AAGCTGCTAT GCGCATGATT GAAGGTACTG CTAGAAGCAT GGGCTTCACT
GTAGAAGACT AG
|
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| Protein sequence | MTVAKKVINV VKLQIPAGAA TPAPPVGPAL GQAGINIVGF TKDFNARTAD QKGMIIPVVI
TVYEDRSFEF ITKTPPAAVL LKKAAKVDKG SGEPNTKKVA KVTKDQVKEI AETKMKDLNA
ADVEAAMRMI EGTARSMGFT VED
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