| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0314 |
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| Symbol | rpsM |
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| ID | 4440567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 344478 |
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| End bp | 344825 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672173 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_814158 |
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| Protein GI | 116628986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 9.88789e-29 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TTGCTGGTGT TGACTTACCC AGAAATAAAA GAGTTGTAGT CGCATTAACT
TATATCTATG GTATTGGTGA ACCAACTGCA AAGAAAATTT GTAAAGATGC TGGTATTTCT
GAAGATATTC GTACTAATGA CTTGACTCCA GAAGATCAAG AAAAATTACG TAGCGAAGTA
GATAAGTACC GTGTTGAAGG TGACCTTCGT CGTGAAGTTA GTCTTAACAT TAAGCGTTTA
GTTGAAATTG GTTCATACCG TGGTATTCGT CACCGTCGTG GCTTACCAGT TCGTGGTCAA
AATACCAAGA ATAATGCTCG TACTCGTAAG GGTTCAAAGA GAAAATAA
|
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| Protein sequence | MARIAGVDLP RNKRVVVALT YIYGIGEPTA KKICKDAGIS EDIRTNDLTP EDQEKLRSEV
DKYRVEGDLR REVSLNIKRL VEIGSYRGIR HRRGLPVRGQ NTKNNARTRK GSKRK
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