| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0307 |
|---|
| Symbol | rpsE |
|---|
| ID | 4438817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 340873 |
|---|
| End bp | 341397 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639672166 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_814151 |
|---|
| Protein GI | 116628979 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 2.29437e-28 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACC GCAACGATTC TCGTAGAGAT TCTCGTAAAG ATCGTAAAAA AGACGATATT
GAAGATCAAT TAGTAGCAAT TAACCGGATC ACCAAGGTTG TTAAGGGTGG TCGTCGAATG
AGATTTGCTG CTGTTGTAAT CGTCGGCGAT AGAAAAGGTC ATGTAGGTTT TGGTACTGGT
AAGGCTCAAG AAGTCCCAGA AGCTATCCGC AAGGCTGTTG AAGCTGGTAA GAAGAGAATG
ATTAAGGTAC CTACTGTTGG TACTACTATT CCACATGAAG TTATGGGCCA TTATGGTTCT
GGTAACATTA TGTTAAAACC TGCTGAAGCT GGTTCTGGTG TTGCTGCTGG TGGTGCTGTT
CGTATTATCA TGGATTTAGC TGGTATTTCA GATGTTACTT CTAAATCACT TGGTTCAAAT
ACACCAATCA ATGTTATCCG TGCTACTATG GACGGTTTGA GTAAGTTAAA GACTCGTGAA
GATGTTTTGA AACTTCGTGA GTCAGCAAAA AGCTTAGAAG ATTAA
|
|---|
| Protein sequence | MANRNDSRRD SRKDRKKDDI EDQLVAINRI TKVVKGGRRM RFAAVVIVGD RKGHVGFGTG
KAQEVPEAIR KAVEAGKKRM IKVPTVGTTI PHEVMGHYGS GNIMLKPAEA GSGVAAGGAV
RIIMDLAGIS DVTSKSLGSN TPINVIRATM DGLSKLKTRE DVLKLRESAK SLED
|
|---|
| |