Gene LGAS_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0297 
SymbolrpsC 
ID4438807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp336486 
End bp337154 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content39% 
IMG OID639672156 
Product30S ribosomal protein S3 
Protein accessionYP_814141 
Protein GI116628969 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.5955900000000001e-28 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGGTCAAA AGATTAACCC AAATGGTTTC CGTCTCGGTG TTAACCGTGA TTGGGAAGCA 
AAGTGGTATG CAGACAAAAA CTACGCTGAC ACTTTAAATG AAGATTTACG TATTAGAAAG
TTCATCTCTG AAAAGTTAGC TGATGCATCT GTTTCCACTG TGGAAATTGA ACGTGCTGCA
AACAGAATTA ACATTTCTAT CCACACTGCA AAACCTGGTA TGGTTATCGG TAAAGGTGGT
AAAGAAGTTG AAGCTTTAAG AAAACAACTT AGTGCTTTAA CTAAGAAGAA CGTTCACATT
AATATTGTTG AAATTAAGAA GCCTGATTTA GATGCTAAAT TAGTAGGCGA AGGTATTGCT
CGTCAACTTG AAGCAAGAAT TGCATTTAGA CGTGCAACTC GTCAAGCAAC TCAAAGATCT
ATGCGTTCTG GTGCTAAGGG TATCAAGGTT CAAACTGCTG GTCGTTTGAA CGGTGCTGAT
ATGGCAAGAA GAGAATGGCA TACTGAAGGT AGTGTTCCAC TTCATACTTT AAGAGCAGAT
ATTGATTATG CTTGGGTAGA AGCTGCAACT ACTTATGGTC AAATTGGTGT TAAGGTTTGG
ATCAATCGTG GTGAAATTTT ACCACAACGT AAGAACAAAC CTTCTAAGAA AACGAAGGGA
GGAAACTAA
 
Protein sequence
MGQKINPNGF RLGVNRDWEA KWYADKNYAD TLNEDLRIRK FISEKLADAS VSTVEIERAA 
NRINISIHTA KPGMVIGKGG KEVEALRKQL SALTKKNVHI NIVEIKKPDL DAKLVGEGIA
RQLEARIAFR RATRQATQRS MRSGAKGIKV QTAGRLNGAD MARREWHTEG SVPLHTLRAD
IDYAWVEAAT TYGQIGVKVW INRGEILPQR KNKPSKKTKG GN