| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0292 |
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| Symbol | rplD |
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| ID | 4438732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 334019 |
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| End bp | 334636 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672151 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_814136 |
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| Protein GI | 116628964 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000472593 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 1.9716100000000001e-28 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCTAATT TAGAAATTAT CGATCAAAAA GGTAAGTCTG CAGGTAATGT AGATTTAAAT
GAAGAAATCT TCGGTATTGA ACCTAATGAA AGTGTTGTTT TCGATGCAAT CATTAGACAA
AGAGCTGGTA AGCGTCAAGG TACTTCTGCT GTAAAGAACA GATCAGCTGT TCGTGGCGGT
GGTAAGAAAC CTTGGAGACA AAAAGGTACT GGTCGTGCTC GTCAAGGTTC TATTAGAGCC
CCACAATGGC GTGGTGGTGG TACTGTATTT GGTCCAACTC CTCGTTCATA CAAGATGGAC
ATGCCTCGTA AAGCACGTCG TTTAGCTATG AAATCAGTTC TTTCCCAAAA AGTTGCTGAC
AAAGATTTAA TCATTCTTGA TCAATTAACT TTAGAAGCAC CTAAGACTAA AGAATTAAAG
GCTATCTTAG ATAATGCTAA CGTTTCTGGT AAGGTTTTAG TTGTGTCTGA TGATAAGAAT
GTTCAATTAT CAGGTAAGAA CCTTCCAAAA GTGAAAGTTG TACCTGTTAA TGGCTTAAAT
GTTGTTGATG CGGTTGACTA CCAAAAACTT GTATTAACTC AAGACGCTAT TAAGAGAATT
GAGGAGGTTT TGGCATAA
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| Protein sequence | MANLEIIDQK GKSAGNVDLN EEIFGIEPNE SVVFDAIIRQ RAGKRQGTSA VKNRSAVRGG
GKKPWRQKGT GRARQGSIRA PQWRGGGTVF GPTPRSYKMD MPRKARRLAM KSVLSQKVAD
KDLIILDQLT LEAPKTKELK AILDNANVSG KVLVVSDDKN VQLSGKNLPK VKVVPVNGLN
VVDAVDYQKL VLTQDAIKRI EEVLA
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