Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0047 |
Symbol | |
ID | 4440469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 60863 |
End bp | 62347 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671909 |
Product | glutamate gamma-aminobutyrate antiporter |
Protein accession | YP_813900 |
Protein GI | 116628728 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 109 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGT GTATAATTAA TTTCCGAAAA AACTTTTTCG GAGGAAATAT TGTGTCTGAC AAAAGCGAAT CGCTGACTAA ATTAGAAGAG GATGAAAAGT ATAACCGACT AACAGCATTG AAGTTATTTG CGATGACTTC ATCAATGGTT ATTTCAGTTA ATGAACTAGC TCCTTTTGGA AAAACTGGAC CAACTGCAGT TTTTTATTTA CTATTAGCTG GGCTAATATG GTTTGTACCA ATTACGCAGA TGGCAGGAGA AATGGCTTCT ATTGACGGCT GGGATAAGGG TGGAATTTTC ACCTGGGTAA AAGGATCGCT GGGAGACCGC GCTGGTTGGA CAGCAATGTT TTATCAGTGG ATTCACATTA CAGTTGGGAT GAACACGATG ATGTACGTTA TTATTGGTGC ATTGTCGATT ACCTTTAATA CCCCCTGGTT TAATACGACA CCAAGTATTA GATTTTTGTT GATGATGGTA ATTATCTGGT CAATTACCAT CGTTGAAATG GTTGGAGTTA AAAAGATTGG TCATATTGCA GAATGGTTAT TTGCCTTAGG AATTGCGTTA CCAGTTATTT TACTGATCGT TACGTTCTTT ATTTATTTAA GTCAAGGGCG TCCCTTATAT ATGCATTTAA ACTGGGATAA TATTATTCCG CATCATTTAA CTGGGACTAC TTTAGTAGCT TTTGTGCCAT TTGTGCTTGC CTTTTGTGGT GGGGAAGCAT CTGCACCGCA CGCTAAATAT TTAGAAAACC CTAAGAAGTA TTCTACTGTG ATGCTTGCTT TAGCAATTAC GGCTATTTCT TTTGATTTAT TAGGTAGTAC AGCAATTGGA ATGTCAGTTC CTAAAGATCA AATCCAAAAT TCAACTGGTT TTGTCTATAC TTTCGGAAAA ATTTTAGACT CAATTGGTTT ACCTGGTGAC TTGATTAAGA AATTTATCGG TGTATTATTA GCAGCTGGTA TTATTGGGGA ATTAGGTAAT TGGCTTGCTG GTCCTAGTCA GGGAATGTTT GAAGCAGCTA AAGAAGGTTA CATGCCTAAG TTTTTTGCAA AATCTACTAA TCGTGATGTT CCAATGCGAT TAATTGTTTT ACAGACTTTG ATTGTAACGG CATCAGCTGT TTTAATTACT TTTACTAGTG GAAAAAACTC GGATTTTGCC TTTAATGTTT CTTTAGCAGC GACTACTGCG CAATACTTAA TGGTTTATAT TTTGATGTTA ATTTCTTATA TTATTTTGAA AATAAGGCAT CGAAATTTAA AACGTAGCTA TTATATGACT AAAAACAATG CGTTAGGCAT TACGATTGCA ATTATTGCCC TGGTAATAAC TGTAGTTGCT TTCTTTATTT CATTTATTCC TGCTCAAGGC ACGCCAGCAT ACTTAAGAGA AGTTTATATT TGGACGATGA TTGGACTTTG CGCAATTGTT ACAATTCTAC CATTGGTGAT TTATCATTAT CATCATCGCT TTTAA
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Protein sequence | MKKCIINFRK NFFGGNIVSD KSESLTKLEE DEKYNRLTAL KLFAMTSSMV ISVNELAPFG KTGPTAVFYL LLAGLIWFVP ITQMAGEMAS IDGWDKGGIF TWVKGSLGDR AGWTAMFYQW IHITVGMNTM MYVIIGALSI TFNTPWFNTT PSIRFLLMMV IIWSITIVEM VGVKKIGHIA EWLFALGIAL PVILLIVTFF IYLSQGRPLY MHLNWDNIIP HHLTGTTLVA FVPFVLAFCG GEASAPHAKY LENPKKYSTV MLALAITAIS FDLLGSTAIG MSVPKDQIQN STGFVYTFGK ILDSIGLPGD LIKKFIGVLL AAGIIGELGN WLAGPSQGMF EAAKEGYMPK FFAKSTNRDV PMRLIVLQTL IVTASAVLIT FTSGKNSDFA FNVSLAATTA QYLMVYILML ISYIILKIRH RNLKRSYYMT KNNALGITIA IIALVITVVA FFISFIPAQG TPAYLREVYI WTMIGLCAIV TILPLVIYHY HHRF
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