Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0030 |
Symbol | |
ID | 4440419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 28890 |
End bp | 30812 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639671892 |
Product | translation elongation factor (GTPase) |
Protein accession | YP_813883 |
Protein GI | 116628711 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TAACAATAGG AATTCTAGCC CACGTTGATG CAGGCAAGAC TACTCTATCA GAAGGCTTAC TTTATCAAAG CGGTACGTTA AGAAAACTAG GTGCAGTTGA TAAAGGAACT GCATATTTAG ACAATGACAA TTTAGAAAAG AAACGCGGAA TTACGATCTT TTCTCATATG GCGCGCATTA AAACTGAAAA TAGCGAATTA CTCCTCTTAG ATACTCCCGG CCACATTGAC TTTGCCCAGG AAATGGAAGA GACGCTTAGC GTATTAGACT ATGCAATTTT AGTTGTGTCG GCTAGTGAAG GCGTAACTGC CTATACACAG ACGCTTTGGA ACTTATTAAA AAGTCACAAG ATTCCAACTT TTATTTTTGT TAATAAGATG GACACGTTAA AGGCTGATAA GGAGAAGGTT CTTCATGACT TAAGTACACT CGATGACAGC TGTGTTGAGT TTGGGGATGA AGATTCTGAT TTTTATGAAA AAATTGCTAC AGCAGATGAG GCAATTTTAG AAGAATATCT AGAATCTGGT CAGATAAAAG ATAAAGAAAT CCAAGATTTG ATCTCTCAAA GAAAAGTTTT TCCAGTTTAT TTTGGTGCTG CCTTAAAATT AAAAGGCGTA GCTGAATTTT TACAGGGACT AGATAAGTGG ACTAAGAAAA TAGAGTATTC TGAGAAATTT GCTAGCCGTA TTTTTAAGAT TTCTCACGAT GAGAAAGGCG AGCGCTTAAC TTGGCTAAAA GTTACTGGCG GCGAATTAAG AGCAAAAAGT GAGCTAATGC CCGATGAAAA GGTAAACGAA ATTCGTCTCT ATAACGGTAA TAAGTATGAA GTGGTTTCGA GTGTTCAAGC TGGCGAAATT GTTGCTGTTA GCGGACTGAA AACAACTTAT CCTGGTCAGG GTATAGGATT TGAAAAGGAT CAAATGAACT TTACAATGCA GCCAGTTTTA AATTATGCAG TGCAAACTAC ACCGGATAAG ACGCATGCGA CTTTAGCGGC TCTAAGACAG CTAGAAGATG AAAATCCGCA ACTGCATGTT AAGTGGGATA AGCAAACAGA AGAAATTAGC ATTGACGTAA TGGGGAAGAT CCAGTTAGAA ATTCTTCAAC AGATTTTGCA TGATCGTTTT AACTTAGAGG TTGAATTTAC TCAAGGCAAG ATTCTATATC AAGAAAGTAT TAGAAACTCA GTTGAAGGAG TAGGTCATTT TGAGCCTTTA AGACACTATG CGGAAGTGCA CTTATTGCTA AAGCCTGGTA AGCTAGGCAG CGGCTTAGTT TTTAAAAATG AATGCAGTCT AGAAGTCTTA CCTAAAAAAT GGCAAGACCA AGTAATGGAG AGTCTAGCTA ACAAAGAACA TCTGGGTGTT TTAACCGGCT CACCTCTAAC TGATGTTGAA ATTACGCTAA TCGGCGGTCG CGGTAGCAAT GTTCATACAG TTGGTGGCGA CTTTAGAGAA GCGACCTATC GTGCAGTGCG ACAAGGTTTA ATGGAGTTAA AAGCACAAAA TCAAGTATCT TTACTTGAGC CTTGGTATCA ATTTACTTTA AGGATTAATC AAGACCAGGT TGGTCGTGCA ATCAATGATA TTGAGAAAAT GGGCGGAAAA TTTAAAATCG GAGAAAGTGA TCATGATATC GTAACGATTA CTGGTCAAGC GCCAGTAGCA CAGATGCAAG ATTATGCAAC TGAAGTTAGG AATTACTCAC ATGGTAGTGG TCAATTAGAA TGTTTATTTG CAGGATATCA AGAATGTAAA AGCAGTGCTG AAGTTATTGC GGATGCAAAT TACGATCCAG TTTCTGATAT TAACAATACA CCTAATTCTG TTTTTTGTTC TCATGGCGCA GGTCATACTG TTGTTTGGGA TGAAGTGCCA AGTTATGCCC AATATCCTTA CTTAAAATCT TAA
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Protein sequence | MKKVTIGILA HVDAGKTTLS EGLLYQSGTL RKLGAVDKGT AYLDNDNLEK KRGITIFSHM ARIKTENSEL LLLDTPGHID FAQEMEETLS VLDYAILVVS ASEGVTAYTQ TLWNLLKSHK IPTFIFVNKM DTLKADKEKV LHDLSTLDDS CVEFGDEDSD FYEKIATADE AILEEYLESG QIKDKEIQDL ISQRKVFPVY FGAALKLKGV AEFLQGLDKW TKKIEYSEKF ASRIFKISHD EKGERLTWLK VTGGELRAKS ELMPDEKVNE IRLYNGNKYE VVSSVQAGEI VAVSGLKTTY PGQGIGFEKD QMNFTMQPVL NYAVQTTPDK THATLAALRQ LEDENPQLHV KWDKQTEEIS IDVMGKIQLE ILQQILHDRF NLEVEFTQGK ILYQESIRNS VEGVGHFEPL RHYAEVHLLL KPGKLGSGLV FKNECSLEVL PKKWQDQVME SLANKEHLGV LTGSPLTDVE ITLIGGRGSN VHTVGGDFRE ATYRAVRQGL MELKAQNQVS LLEPWYQFTL RINQDQVGRA INDIEKMGGK FKIGESDHDI VTITGQAPVA QMQDYATEVR NYSHGSGQLE CLFAGYQECK SSAEVIADAN YDPVSDINNT PNSVFCSHGA GHTVVWDEVP SYAQYPYLKS
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