Gene LEUM_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_2000 
Symbol 
ID4423713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1968209 
End bp1969030 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content34% 
IMG OID639675694 
ProductHAD superfamily hydrolase 
Protein accessionYP_819443 
Protein GI116619072 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA AAATAAAAAT GATTGCCCTA GATATGGACA ATACGCTGCT TATGCCAAAT 
AAAACCTTAT CCGAAAGGAA CATAAAAGTT CTACAAAGTC TACACACTAT GGGAAAAAGC
ATAGTGCTGA CCACTGGTCG CCCATTCCCC AACGTGCAGC CTTTCCTTTC ACAACTGCAA
TTGAATCAAA ATAATGATTA CGCCATTCTA TTTAACGGAG CAATTATCAA AAACATATAT
ACAAATCAAA ATCTAATCAA TCATGTCTTT ACTCTTTCAG ACGTTGATGA AGTGTTTAAC
TTAATACATA ATATTCGTTT GCCAATTGAC CTTGTTACGC AAGACAGCGT ATATTCTATT
AAAGATTTTG GAAAATCTGG GTATGTTGAA TTAGTAGGGA AACTTATTCC TTATTCAGAA
AAACTTTTAT CTGAATTAAC TCCAGATCTG ATGTTTAATA AGTTTGTCGT CTGCGCCACG
GACGCAGAGT TAAATTATTT AGAAAACGTT CTCCAACACA CGCCCATACT AACTAAAAAT
ATAAATTTTG TCAGATCAAG AAGAAATTTA TTAGAGTTTG TTCCAAATAA GGTTAATAAG
GGCGCTGCAT TATCAAAACT ACTCAAACAG TTGTCATTGA CTCCAGATAA TTTAATGGCC
TTTGGTGATG AAGCAAATGA TTACTCTATG TTGAGCTTAG CCAGAGTTTC AGTAGCTATG
GATAATGCCA TCCCATCGAT TAAAAAAGTA TCAACAAACA TTACTAAGAG CAATGCAGAA
GACGGCGTAG CTGAATTTTT GGAAAGTTAT TTTTCATTGT AG
 
Protein sequence
MTNKIKMIAL DMDNTLLMPN KTLSERNIKV LQSLHTMGKS IVLTTGRPFP NVQPFLSQLQ 
LNQNNDYAIL FNGAIIKNIY TNQNLINHVF TLSDVDEVFN LIHNIRLPID LVTQDSVYSI
KDFGKSGYVE LVGKLIPYSE KLLSELTPDL MFNKFVVCAT DAELNYLENV LQHTPILTKN
INFVRSRRNL LEFVPNKVNK GAALSKLLKQ LSLTPDNLMA FGDEANDYSM LSLARVSVAM
DNAIPSIKKV STNITKSNAE DGVAEFLESY FSL