Gene LEUM_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1863 
Symbol 
ID4423594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1837324 
End bp1838721 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content40% 
IMG OID639675558 
Productmajor facilitator superfamily permease 
Protein accessionYP_819311 
Protein GI116618940 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0147099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATATAA CACAAAAGCA AAAAACAATC TTAATCATAT TAGTTATCGG CACCTTTTTA 
GGCTTTTTGA ATCAAACATT AATGAATGTT GCCTTGCCAG ATATCATGCG TGAATTTCAT
ATTTCCACAG ACTTGGGTCA ATGGATGACA AATGGCTACA TGTTAGTCAA TGGTGTGATG
GTTCCGTTAA CAGCTTTTCT GATTCAACGC CTAACAACAC GTACACTATA CTTGACCGCC
GCTGGACTAT TCGCCGTCGG AACAGTAACT GCTGGATTTG CGCCAACATT TGATGTCCTC
ATTATCGGGC GTATGATTCA AGCAATGGGC GCCGGTGTAT TCGGCCCTTT AATGAACGTC
GTTGTCATGA ACTTGTTTTC GCCCAATGAA CGCGGATCTG CAATGGGAAC AATCGGTTTG
GCGCTTAATT TCGCCCCTGC TTTGGGTCCC AGCTTGTCGG GATTAGTCGT TACTAATTTA
AGTTGGCGCT TCCTATTTTA TCTTGTCGCA CCATTAATTA TTGCGAACTT CATCTTGGCT
TATTTCTTAC TACAAAATAT TGGGCAACAA AAGAGGTTAA AATTCGATTT TATCGGCGTT
GTTTTGTCAA GTATTGGTCT TGGATCATTA CTTTACGGAT TTTCTAACGC AGGTGCAACC
CCTTGGAATG AGTTTACTGT ATGGGGATTT GTATTAATAG GTATTATTGT TACAAGTTTA
TTCATTTGGC ACCAGTATAC AACTAAAACA CCATTGTTAA ATATGTCCGT ATTTAAATAT
AGACAATTTA ACGTTGCTGT TTTAATCAAC GTTGTTTTGA TGATTGCTAT GTACGGTGGT
GCACTGATGT TACCCCTCTA TATGCAAAAT GTGCGTGGTA CCACGGCTTT TCAATCAGGT
CTAGTGTTGT TTCCTGGTGC CTTAGTAACC GCATTTTTAT CACCGTGGAG TGGTCGTTTA
TATGATCGCT ACGGTGCTAA ATACTTAACA TTAGTTGGTA TTATGATTAC AGCGTTTGGC
ACTTTTATTT TAGCTTCTCT GACATTAACA ACTTCACTTT GGCTCGCTGT TCTCGGACAG
TTTGTCCGTC AACTTGGACT AGTCTTGGTC CTGATGCCAA TTCAAACAGA GGCCTTCAAT
GCGTTACCTT TAACACTCAT TCCTGATGGA TCTGCCATGT TTACTACAAT CAGACAACTT
GCAGCATCAT TTGGTACAGC CGCTTTGGTA ACAATTATGA CGAAAAGTGC ACTTAACTAT
GGTCATAAAC ACGCACACCT CAGTGCTGAA ATAGTTGATT TGCATGGTGT ACAAGTAACT
TTTTTAACTG CTGCATTCTT AATGTTGGTT GCAGCAAGTT TAACTAGCCT ACTAAAACTT
AAAACACGCG CCACATAA
 
Protein sequence
MNITQKQKTI LIILVIGTFL GFLNQTLMNV ALPDIMREFH ISTDLGQWMT NGYMLVNGVM 
VPLTAFLIQR LTTRTLYLTA AGLFAVGTVT AGFAPTFDVL IIGRMIQAMG AGVFGPLMNV
VVMNLFSPNE RGSAMGTIGL ALNFAPALGP SLSGLVVTNL SWRFLFYLVA PLIIANFILA
YFLLQNIGQQ KRLKFDFIGV VLSSIGLGSL LYGFSNAGAT PWNEFTVWGF VLIGIIVTSL
FIWHQYTTKT PLLNMSVFKY RQFNVAVLIN VVLMIAMYGG ALMLPLYMQN VRGTTAFQSG
LVLFPGALVT AFLSPWSGRL YDRYGAKYLT LVGIMITAFG TFILASLTLT TSLWLAVLGQ
FVRQLGLVLV LMPIQTEAFN ALPLTLIPDG SAMFTTIRQL AASFGTAALV TIMTKSALNY
GHKHAHLSAE IVDLHGVQVT FLTAAFLMLV AASLTSLLKL KTRAT