Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_1565 |
Symbol | rnc |
ID | 4423295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 1566605 |
End bp | 1567315 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639675260 |
Product | ribonuclease III |
Protein accession | YP_819030 |
Protein GI | 116618659 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCACAAG ACAGTTTTAA ATCATACATT TTAAAAAAAT TTAATATCTC ATTTAATGAC GAAAGCTTAT TAACAGAAGC TTTAACGCAA CGCAACTATT TGAATGAACA TCCGGACGAA AAAGGTCGCG ACTACCAGCG TCTGGAGTTT CTAGGTGACT CTGTCATGCA AATGATTGTT GCTGAGTATT TGTTTAAGCG CTATCCTGAC TGGCATGAAG GTCAATTGAC CGAAATGCGT ATTGCAATGG TTCAAACAAG ATCATTTGCG CATTTCTCAC GCATGGTTCA TTTAAACGAA GGTATTCGTT TAGGAAAAGG TGAAGAGATG AGCGGGGCGC GGGATCGCGA CTCATTGCTT GAAGATATTT GGGAAGCTTT TATTGGTGCA TTGTATCTAG ATCAAGGGGC AGATGTCGTT AGACAATTCT TAAATCAAAC ATTATTTGCA GCAATTGATA CAGACTTTTT TGATCGTTTT ATTGATTTTA AAAGCCGATT ACAAGAGCGA TTACAGACCA AAGGGTCTGT GGATATTGAT TATCAGACCG AAAAAGAGGA ACAATTATCA GATAATACCC AATTATTTGA AGCGAGTGTC TCCGCTAATG ACAAAGAATT AGCGCGTGGT ACTGGTAAAT CCATCAAAGA TGCTGAAAAA GCAGCTGCCA GAGCAGCACT AAAAATACTG GAAGATAATG TCAACTTATG A
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Protein sequence | MSQDSFKSYI LKKFNISFND ESLLTEALTQ RNYLNEHPDE KGRDYQRLEF LGDSVMQMIV AEYLFKRYPD WHEGQLTEMR IAMVQTRSFA HFSRMVHLNE GIRLGKGEEM SGARDRDSLL EDIWEAFIGA LYLDQGADVV RQFLNQTLFA AIDTDFFDRF IDFKSRLQER LQTKGSVDID YQTEKEEQLS DNTQLFEASV SANDKELARG TGKSIKDAEK AAARAALKIL EDNVNL
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