| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1537 |
|---|
| Symbol | |
|---|
| ID | 4423267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 1537020 |
|---|
| End bp | 1538132 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639675232 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_819002 |
|---|
| Protein GI | 116618631 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA TTAAAAAGTT AGCAAACATT TTAAATGCTG ATGTTATTTT GATTGACATT
GCCACAAAAC AAGTAAATTA CTTAGATGAA TCTACTAATA ATTCCAATAA AAATGTTGTG
AATTTATTAA TTGATAATAT TGAGCTGCTC ACAAATCACA TTTATCAATC TCTAGACTAT
AATTCTGGTC ATATTTTAAC TTGCCATGTC AATGAAGAAA GCATCGTTTG CTTCTCTTTT
AAATACGACG ATCCACTATC AACGAGTAGT GAGTTAATGA TGTTACATTC CCTTTCAAAT
CTAAAATCCA TTTCTCAAAT CATCTATACT TTATATAATT CTAACGATGC GCCAGAAGAA
GAGGTCCACA TTACAAAGTT TTCAGATAAA CTCCACATCA AAAAAGAAAG CAGCGAATCC
TTTGATCCAA AAACTTTTTT TAATGCAGAA ACTGATATTA TCAAATCGAT TGTTTATTCA
CGTAAAGCCA GTTTAATCTC AGCACTTGAA AAGTTGTCAC GTTTAAAAAT AATTGGTGAA
CGTTTTGCCT CCAACAACAT GATTAGAGGC GAAAAAGATA CGCTTATTTC CTATGTCTCA
ATTTTAAACC GAGCGATTAT CCAGTGGGGG TACCCTGTCG AGTCAGCATT TCAATTGCAT
AATGAGCTTG TGCAAGAAAT TGAACTATCT CCTCAGTTCC TGAATTTTTT TCAAGTTATT
AGAGAAATTA CTTGGCATTA TTTTAAAATT GTACAAAACC ATAGGGTTCA CAATTTTTTA
CCACTCCACC AAAGAATTAA ACAATATATA AAAGAGCATA TTAGCGAAAA CATTACACTC
GATGACATTG CTACCGCACT GAATGCTTCG AAAAAGACAT TGAATCCAGC GTTCAAAAGA
GAGTATAAAA TAACGATCAC TCAATTCATT AGGCAAACCA AAATAGATAC GGCAAAAGAA
TTGTTGATTG CTTCGAATCT CACATTACTG GAGATTTCAA ATTTACTATC TTTTTCAACC
GCAAGCTATT TTGTCAAAAC TTTCAAAGAA ATAACCGGAA TAACTCCTAA TCATTTTCGC
CAACATTTTT TTGATGAAGA ACTTCATTTG TAA
|
|---|
| Protein sequence | MKDIKKLANI LNADVILIDI ATKQVNYLDE STNNSNKNVV NLLIDNIELL TNHIYQSLDY
NSGHILTCHV NEESIVCFSF KYDDPLSTSS ELMMLHSLSN LKSISQIIYT LYNSNDAPEE
EVHITKFSDK LHIKKESSES FDPKTFFNAE TDIIKSIVYS RKASLISALE KLSRLKIIGE
RFASNNMIRG EKDTLISYVS ILNRAIIQWG YPVESAFQLH NELVQEIELS PQFLNFFQVI
REITWHYFKI VQNHRVHNFL PLHQRIKQYI KEHISENITL DDIATALNAS KKTLNPAFKR
EYKITITQFI RQTKIDTAKE LLIASNLTLL EISNLLSFST ASYFVKTFKE ITGITPNHFR
QHFFDEELHL
|
|---|
| |