| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1373 |
|---|
| Symbol | |
|---|
| ID | 4423121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1359268 |
|---|
| End bp | 1360206 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639675068 |
|---|
| Product | ribosomal large subunit pseudouridine synthase D |
|---|
| Protein accession | YP_818839 |
|---|
| Protein GI | 116618468 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA AAATATTAAT TCATATAACA GATCAAGCTG GGCGTGTTGA TGCTGTGTTA
TCGAAAGAAA ATCTGAGTTA CTCACGTACC ACACTCTCAA ATTGGCTAGT GGATGGTACG
ATTTTAGTTA ATAATCATAA AGTAAAACGC TCATATAAAG TTGTCAGTGG AGATACAATA
TCTATTACTC CACCTGAGAC TCAAGAAACA AAGATCGAAG CTGAAAACAT TCCGCTTGAT
ATTATTTATG AAGATGATGA TATTATTGTT GTAAATAAGC CACAAGGAAT GGTCGTGCAC
CCTGCTGCAG GACATAGTTC TGGTACATTG GTGAACGCAT TACTTCATCA TTCACCATTG
TCAACCATCA ATGGTGAATT CCGACCTGGA ATAGTACATC GCATTGATCG TGATACCAGC
GGCCTACTAA TGGTCGCAAA AAACGATAAG GCTCATCGTT CACTATCTGA ACAGTTAAAA
TCTCATAAAA ATCAGCGCGT GTATTACGCG CTAGTCCGTG GTGAATTTAC GGAAGATTCA
GGAACAATTG AAGCTCCGAT TGGACGTCAT AAAATTGATC GAAAAAAACA AGCAGTTATT
GAAGGCGGAC GTGAGGCTGT CACGCATTTT CGTGTCTTAA AACGATATGT TGGTTATACG
CTGTTAAAAG TGAGTTTAGA AACTGGCAGA ACGCACCAAA TAAGGGTGCA TATGAGTTAC
ATTGGTCATC CAGTTGTTGG GGATCCGGTA TACGGCACGG CACAGAAGCT AGATGGTACA
CAGTTGAATG GGCAATTATT GCATGCTAAG ACACTGACTT TAGAGCAACC TACAACAGGC
GATGAACTGT CATTTGACAG TCCATTACCA GATTACTTTC AGTTTGCTTT ATCAACATTA
ACACCGATTA ATAGAGAGGA AGATGAATAT GCCAAATAA
|
|---|
| Protein sequence | MANKILIHIT DQAGRVDAVL SKENLSYSRT TLSNWLVDGT ILVNNHKVKR SYKVVSGDTI
SITPPETQET KIEAENIPLD IIYEDDDIIV VNKPQGMVVH PAAGHSSGTL VNALLHHSPL
STINGEFRPG IVHRIDRDTS GLLMVAKNDK AHRSLSEQLK SHKNQRVYYA LVRGEFTEDS
GTIEAPIGRH KIDRKKQAVI EGGREAVTHF RVLKRYVGYT LLKVSLETGR THQIRVHMSY
IGHPVVGDPV YGTAQKLDGT QLNGQLLHAK TLTLEQPTTG DELSFDSPLP DYFQFALSTL
TPINREEDEY AK
|
|---|
| |