Gene LEUM_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1157 
Symbol 
ID4422919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1154840 
End bp1155487 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content39% 
IMG OID639674854 
Productthiamine biosynthesis protein ThiF 
Protein accessionYP_818628 
Protein GI116618257 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID[TIGR02354] thiamine biosynthesis protein ThiF, family 2 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAA TTAATATTGA TGGTTACAGC GTTCAAGAAG TATATGAAGA TATGAAACAA 
CGCAATGTGC CAGGAACGTC AGAAAAACTT GCACAGGCCC ATGTGACTAT TGCAGGCGCT
GGTGGACTTG GCTCTAATAT TGCCATCGCA TTAGCGCGTG CAGGAGTAGG GCATTTGACT
TTGATTGATT TTGATGCTGT TGAGTTGAGT AACCTGAATC GACAGCAATT TAAATTGAGT
CAAATTAATG TACCAAAGGT GATTGCGCTA AAACAAAATA TATTAGAGTT CAATCCATTT
ATTACAATTT CAACAATTCA AGAAAGAGTC ACGTCGCAAA ATGTTGAAGC TCTATTTGGT
GATAGTGATA TCATATGTGA GGCATTTGAT GACCCGCATA GTAAAGCAGT CCTATTAGGT
AGTTCTCGTG AAATTTTTCC AAATAAACCG CTTGTTATGG GCAACGGGTT AGCTGGAATT
CATAGTCCAA ATAATATTAA AACGAGACAA CAGAGCGAAA ATGTATACAT CTGTGGGGAT
AACATTAGTG CTGGAGTAGA AGGATTGATG GCACCAAGAG TGCTTGTGTG CGCTGGTCAT
CAAGCAAATG TCATTTTACA GCTAATACTC GGTAAAGTGG CTTTATAA
 
Protein sequence
MHKINIDGYS VQEVYEDMKQ RNVPGTSEKL AQAHVTIAGA GGLGSNIAIA LARAGVGHLT 
LIDFDAVELS NLNRQQFKLS QINVPKVIAL KQNILEFNPF ITISTIQERV TSQNVEALFG
DSDIICEAFD DPHSKAVLLG SSREIFPNKP LVMGNGLAGI HSPNNIKTRQ QSENVYICGD
NISAGVEGLM APRVLVCAGH QANVILQLIL GKVAL