| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1130 |
|---|
| Symbol | |
|---|
| ID | 4422892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 1128845 |
|---|
| End bp | 1129762 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639674828 |
|---|
| Product | IS30 family transposase |
|---|
| Protein accession | YP_818602 |
|---|
| Protein GI | 116618231 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.679883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGTT TATCATCTCA AGAACGCACT GTCATTCAAA CTTTACTCGA ATTGAATTAT
TCTGTTCGTG CCATTGCGCG CTTTATTAAA CGCTCTCCTT CAACCGTTTC GATTGAAATT
CATCAAGTTA CACCCTATAA AGCTGAGATT GCTCATGCGT TGGCATTGAA AAAACGTCAT
CTACGTGGTC GTCATGACAC GCTAACACCA GCTATCGCTG TCTTTTTGAA TCACCACATT
GGTATATTGA AGTGGTCACC AGAAACCGCT GCGCATGTTT TAGGGTTACC TTTCAAAACG
ATTTATAATT GGCTCAATGC TGGTCGACTC AAACTATCAT TGGCTGATTT ACCTGACAAA
GGTATCCGTC AAAAGCGTCA ATCTGATGGT AGACGACAAG TATTTGTGCA TGGTCGTTCG
ATTGAAACGA GACCTGAAAG TGTGAAAGCA CGACAAACCT TTGGACATTT TGAAGTTGAC
ACCATGCAAT CGGGTAAAAG ACGTGGCGAT GTGCTGGTGA CAATTACTGA AAGACTAAGC
CGGCAACATA TTGTGAGGCA AGTTAGTGGT CGCAATAGTC AGGCAGTGAC ACCAGTCTTA
ATTCGTTTTT TTCAAGGGAT CAAAAATGCC AAGTCAATCA CTGTTGATCG TGGGCGAGAA
TTTGCAAAAT ATAACGAAAT CGAGCAAAAA CTAGGCATTC CAGTCTATTT TGCGCACCCG
TATTCACCTG AAGAACGTGG GAGTAATGAG ATATTAAATC GATACGTCCG TCGTTTTATA
CCGAAAGAAC GTAAAATTGA AACAGTTAGC GCCAAAGAAT TAGATCAAAT TAATCATTGG
ATCAATGCGA GACCAATGAA AACACTCAAC TGGCAATCAC CACGAAAGGT TTTTCAGCAG
TTTGCAGTGT TCGGTTAA
|
|---|
| Protein sequence | MTSLSSQERT VIQTLLELNY SVRAIARFIK RSPSTVSIEI HQVTPYKAEI AHALALKKRH
LRGRHDTLTP AIAVFLNHHI GILKWSPETA AHVLGLPFKT IYNWLNAGRL KLSLADLPDK
GIRQKRQSDG RRQVFVHGRS IETRPESVKA RQTFGHFEVD TMQSGKRRGD VLVTITERLS
RQHIVRQVSG RNSQAVTPVL IRFFQGIKNA KSITVDRGRE FAKYNEIEQK LGIPVYFAHP
YSPEERGSNE ILNRYVRRFI PKERKIETVS AKELDQINHW INARPMKTLN WQSPRKVFQQ
FAVFG
|
|---|
| |