Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0568 |
Symbol | |
ID | 4422419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 537699 |
End bp | 539741 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639674278 |
Product | NAD-dependent DNA ligase |
Protein accession | YP_818055 |
Protein GI | 116617684 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACCAG ATTTTACGCC AATTGAAAAA TTAACAACAC AAGACGCGCA ACAAGAAACC GCGCGATTAC AAAAGCAGCT TGTGCAATAT GGCACGGCTT ATTATGAAGA TGACGCGCCA CTAGTTGAGG ACTACATTTA CGATGCATTA TATGCGCGGT TAGTTGCGTT AGAAGAAAAA TTTCCACAAT ATGTGATTCC AGATTCACCA ACACAGAATG TTGGTAGCGC AGATACAAAG TCTGAATTAC AAAAAGTGGT ACATCCTGCC CCAATGCTGT CGTTAGGGGA TGTATTTAGC TTAGACGAAC TTAACGACTG GGATGCAAGA ACAACCAAGT CGCTTGGAAA CCAAGCACCT TATAATTTAG AGTTAAAAAT TGATGGCTTA GCAGTTGCAT TGACCTACGT TGACGGGCAA CTAGTACAAG CTTCTACGCG TGGAAATGGT ATCGTTGGTG AAGATGTTAC AGCGAATGTG AAAACAATTA AAGCAATACC AAAAAAACTG ACTGAACCAT TAACCATTGA GGTACGTGGC GAAATTTATA TGCCAAAAGC TAGTTTTGCT GCTCTAAATA AGCAGCGAGA GGCTGATGGT TTAGAACCTT TTGCTAATCC TCGTAATGCT GCAGCCGGTT CCTTACGTCA ATTGAACGTT AAAATTACTA AGTCACGAAA CCTAGCGGCT TTTGTATACT ATACGGCTGA ACCTGAAATG CTAGGAGTGA CAACTCAAAG TGGTGCGTTA GAACGATTTG CAGAATTAGG TTTGCCAACA GACACACACA ATCGTGTCAT CAATAAAATG GCCGATATTG CTGACTATAT TGATGAGTAT ACTTCGGAGC GCGAAAGCTT GTCTTATGGT ATTGATGGTG TTGTTGTTAA AGTGAATCAA CTAGATTTAC AGTTTGATTT AGGGAATACA GTTAAAATCC CACGTTGGGC TATCGCTTAT AAATTTCCTC CGGAAGAAGC TTTGACAATC GTTTGTGACA TTGAATGGAC TGTTGGACGA ACTGGGGCGG TAACACCTAC TGCAGTTATG GACCCCGTTT TGCTAGCGGG TACAACTGTG CAACGTGCTA GTTTGCATAA TCCTGATTAT TTAAGGGAAA AGGATATTCA AATTGGTGAT ACGGTTACGC TACACAAAGC GGGTGATATC ATTCCAGAAA TCGGGCAAGT CATTTTAGAA AAACGTCCGA CAGATAGTGA AACTTATCAG GTTCCGACAA TATGTCCTGC CTGTGAATCA AATTTAGTTC ACATTGAAGG TGAAGTAGCA CTCCGCTGTA TTAATCCATT CTGTTCAGCT CAAATTCAAG AAGGACTAAC ACATTTTGCG TCAAGAAATG CAATGAATAT TGATGGCATG GGACCAAGAG TTGTCGGTCA ACTACTAAAG GCAGGCTATA TTAAAGATGT GGCGTCCATT TACCGCATAA CGGTTGAACA ATTACTAACT TTAGACAAGT TCCAAGAGAA ATCAGCTGTG AAGTTAATTG ATGCAATTAA CAGTTCAAAG GAAAATTCTC TTGAACGCTT ATTATTTGGC TTAGGGATTC GCATGGTTGG TGCAAAAGCG GCTCGACTGA TAGCAGAAAA GTTCAGGACC TTATCAGCTG TTTCAGAAGC CTCTGTTGAA GACATCGCAA ATATTAATGG TATTGGTCAC ACGATTGCCC AGTCAATTGT TCAATACTTT AGTACGCCAG AATCTAAGCA ACTACTTGTC GAACTAGCTT CTTCCGGTGT TAACCAATCA TATTTATCTG ATACAGTGAT TGACGAAAAT TCATTTTTCT ATGGCAAAAA GGTAGTCTTA ACTGGTAAAC TAGAACAGAG TAGTCGACCT GCTGCAACAA AATGGTTGCA AGATCATGGG GCTAACGTCG CCGGATCAGT GTCAGTGAAA ACAGACTTAG TTATTGCAGG AGAAGCTGCA GGTAGCAAAC TTGATAAAGC TAGTCAATTA GGTGTTACAG TTTGGACCGA ACAACAGTTT GTTGATGAAC AAGTAAAAGA GGACGGAAAA TAA
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Protein sequence | MLPDFTPIEK LTTQDAQQET ARLQKQLVQY GTAYYEDDAP LVEDYIYDAL YARLVALEEK FPQYVIPDSP TQNVGSADTK SELQKVVHPA PMLSLGDVFS LDELNDWDAR TTKSLGNQAP YNLELKIDGL AVALTYVDGQ LVQASTRGNG IVGEDVTANV KTIKAIPKKL TEPLTIEVRG EIYMPKASFA ALNKQREADG LEPFANPRNA AAGSLRQLNV KITKSRNLAA FVYYTAEPEM LGVTTQSGAL ERFAELGLPT DTHNRVINKM ADIADYIDEY TSERESLSYG IDGVVVKVNQ LDLQFDLGNT VKIPRWAIAY KFPPEEALTI VCDIEWTVGR TGAVTPTAVM DPVLLAGTTV QRASLHNPDY LREKDIQIGD TVTLHKAGDI IPEIGQVILE KRPTDSETYQ VPTICPACES NLVHIEGEVA LRCINPFCSA QIQEGLTHFA SRNAMNIDGM GPRVVGQLLK AGYIKDVASI YRITVEQLLT LDKFQEKSAV KLIDAINSSK ENSLERLLFG LGIRMVGAKA ARLIAEKFRT LSAVSEASVE DIANINGIGH TIAQSIVQYF STPESKQLLV ELASSGVNQS YLSDTVIDEN SFFYGKKVVL TGKLEQSSRP AATKWLQDHG ANVAGSVSVK TDLVIAGEAA GSKLDKASQL GVTVWTEQQF VDEQVKEDGK
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