Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0562 |
Symbol | |
ID | 4422413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 530162 |
End bp | 531889 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639674272 |
Product | cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component |
Protein accession | YP_818049 |
Protein GI | 116617678 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.474436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATA AAAGACTTTT TGCGTTACCA GGTATTATTA GTTCTTTGGT AATCTTAGTT ATTTTGACAG GAATTCAAGC ATTTTCGATT ATATTCCAGG GAGTTTTCTT GGCCCGAGCA ATTGCTGATT TATGGCAAGG TAAAAGCATT GACCAAACAC TTATTAATGT ATTGTTTTTT GCGTTTTCTT TTTTGGTGAG ACAACTATTG ATTGTGTTAA AAAATAACTA TATGTCGAAA TTTGCTGATC GTACAGTGGA AAATTATCGT ATTCAATTGT TGGCTAAGTA TGCCGAAATT GGCCCTAGTA TTATTAAACA ATCGGGCACA GGAAATGCAG TTACAACACT AGGTGCGGGA TTGGATAATG TTAAAAACTA TTTTCAACTA CTACTGATTA AAGTTTTTGA TTTGAGTATT ATTCCTTGGT TAATTCTGCT ATATATTGTT TATCTTAAGT GGGAACAGGG ACTATTTTTA TTGCTAGTAT TTCCAGTGGT TATATTGTTT TTCATCATTT TGGGCTTGGC AGCACAAAGT AAAGCTGATG CAGAGTTCGC TAATTTTAAG AACTTAAATA ATCGTTTTGT AGATGCTTTA CGAGGCCTGC CAACCTTGAA GCAACTAGGT TTATCGCAAT CATATGGTGA CGAAATTTAT AATATTTCAG AAGATTATCG AAAAACAACC ATGCGAACGC TGAGAATTGC GATTACATCA ACATTTGCGC TTGATTTTTT TACGACTTTA TCAGTTGCAA TTGTTGCTGT GTTTTTAGGA ATGGATTTAA TGAACGCCAA AATGGCACTT TTCCCAGCGT TGACAATTTT GATTTTAGCG CCAGAATATT TTCTTCCTTT GCGTAATTTT GCTGATGATT ATCACGCAAC TTTGAATGGT AAAAATTCAC TAACTGATGT TTTGGAAGTA ATTGATACCA AAATTGTCGG TCCACAAGAT GAACTTCAAT TAAATAAATG GCAAGCAGAG AGTGAATTGT CATTGAACGC TGTGCAGTTT TCTTATGACT CAAAAGTCAC CTTGAAAGAT ATTTCGTTGC ACGCTAAAGG GTATCAAAAA ATTGCTTTGG TTGGGGAAAG TGGTTCTGGT AAATCTACAC TACTAAGTAT TTTGGGAGGC TTCTTACAAC CTGAACAAGG AACGATAAAT ATCAATGGAC AGGAGATCAA ACATTTAACA CAACAGCAAT GGCAGAAGCA GTTTTTTTAT ATGCCACAAA CACCTTATAT TTTTCATGAA TCGTTACGTG ATAATATTAG GTTTTACGCA CCAAGTGCTA GTGACGAAGC AATCAATGAA GCTGTTGAAA AAGCAGGTTT ATCCAGTTTG ATTGATGAAT TGCCAGCAGG GTTGAATACA GTAATTGGTG AGAGTGGGCG TCAACTATCT GGCGGGCAGG CGCAGCGTGT AGCCTTAGCA AGAATGTTGC TAGATTCATC TCGTAAAGTG CTCCTTTTTG ATGAACCAAC GGCTCATTTA GATATTGAAA CTGAAATTGA TTTAAAGAGA ACGATGTCAA CTATCTTGGA TAAGCACTTA GTTTTTTTTG CAACACACCG GTTACACTGG TTAGATCAAA TGGATTTAGT TATTGTGATA CGTGACGGGC GCATTGTGGA AACTGGCGTG CCTGGTGTCT TACTAGCTGA TACCAATAGT GCTTTGAATG CGCTGCGTCA TGAATTGCAT AAAGGTGGTC TGAAATGA
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Protein sequence | MIDKRLFALP GIISSLVILV ILTGIQAFSI IFQGVFLARA IADLWQGKSI DQTLINVLFF AFSFLVRQLL IVLKNNYMSK FADRTVENYR IQLLAKYAEI GPSIIKQSGT GNAVTTLGAG LDNVKNYFQL LLIKVFDLSI IPWLILLYIV YLKWEQGLFL LLVFPVVILF FIILGLAAQS KADAEFANFK NLNNRFVDAL RGLPTLKQLG LSQSYGDEIY NISEDYRKTT MRTLRIAITS TFALDFFTTL SVAIVAVFLG MDLMNAKMAL FPALTILILA PEYFLPLRNF ADDYHATLNG KNSLTDVLEV IDTKIVGPQD ELQLNKWQAE SELSLNAVQF SYDSKVTLKD ISLHAKGYQK IALVGESGSG KSTLLSILGG FLQPEQGTIN INGQEIKHLT QQQWQKQFFY MPQTPYIFHE SLRDNIRFYA PSASDEAINE AVEKAGLSSL IDELPAGLNT VIGESGRQLS GGQAQRVALA RMLLDSSRKV LLFDEPTAHL DIETEIDLKR TMSTILDKHL VFFATHRLHW LDQMDLVIVI RDGRIVETGV PGVLLADTNS ALNALRHELH KGGLK
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