| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0456 |
|---|
| Symbol | |
|---|
| ID | 4422323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 418863 |
|---|
| End bp | 420251 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639674166 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_817945 |
|---|
| Protein GI | 116617574 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATG ATAAGTTATC CCCACGTTTG GTGCTAAGTG TCTTAGCGAT TGGATTGCTG
GGATTTACTG ATATTATGTT AGAAACTGCC TTGAACGTCA GCTTTCCAAT GTTGATGACA
GAATTTAAGG TAACCTCTAG CACAGTACAA TGGTTGACCT CAGGTGTCAT CTTGTTGACA
AGTATGGTAG TTATTTTGTC GCCATGGTTA AAGAAAAACT TCACCAATCG GAGCCAGTTT
ATTGTTGCCA CGGTTATATC GATTGTAGGT GTGCTGATTG ATGCTGTGAG TAATACCTTT
GTGATTACAT TGTTCGGCCG GTTGCTACAA GGGATTGGTG GTGGCGTTGG CTTACCATTA
ATGTATAATG TTATTTTCGA ACAAGTTCCT GAGAAAAAGC GTGGCACGAT GGTCGGACTT
GGCTCATTAA TTATTTCTTT TGCTCCAGCA ATTGGTCCAG CTTTTGGTGG TTATCTAACT
CAAAATTACG GTTGGCATAT GGTCTTTTGG GTTGTGCTGC CCGTTCAAAT TGGTTCTCTC
ATACTTGGGT GGGCCACAAT CAAGCAAGTT TCAACAATTA AAAAAGAAAA ATTAGATATT
ATTGGCTGGC TCTTGTTAAG TCTGTTTTTT GTCTCTGGTA TTTTTGTCAT CGAAAGAATC
AGCACACATG GATTAGTAAA TCTTTTAAGT TTATTGATGA CTTTGGCGAT GTTTGTGGGT
ATTATTGGAT ATATTCTTTA TGCAAAAAGA GTTGACAATC CATTGTTAAG CCCAGAAATA
TTTAAGTTTA AGGTTTTTCG TTTTGGTATA GCAGCGGCAT TTGTAGCTCA AATAGTTAAT
CTAACGTTTA ACTATGCAAT ACCCATGGTT CTACAAATTG TTTTACTCAA AAATCCACAA
GTTGCCGGTT TGACTTTACT TCCAGGTGCT TTAAGTTATG CTATGATGGC TATAATTTCT
GGTCGCCTAT ATGATCGATA TAGTGCACGG CTACCAATTA CAATTGGTGT GACATTGATG
TTTGTTGGGA CGTTACTAAT TGCATTTATC CCAATTAATC TCATTAGTTT AACAGGTGGA
TTCATGGTTA TTCAGATAGG GGCTGGTTTC TGGTTTGGTA ACAACATGAC CTATTCGGTA
AGCAGTGTAC CAGTTGAATT TCAAAGCTCA GGAAATTCTA TTTTTTCTGC AACAACGAAC
TATTCCGCTG CAGTTGGTAT TGCACTTGCT GCTGGCATTA TTGCTACATT TCAAAAGCAA
GCAATTAACG TACGTGAGTT GGCTTCATCA ACACACATTG GTGCATTGTG GACATTTAGA
GTGGACATAG TACTGATTGT TCTAGCCGCC ATTCTTTCAT TAAGTGCTTT AGGTTCTATA
AGAAAATAG
|
|---|
| Protein sequence | MIDDKLSPRL VLSVLAIGLL GFTDIMLETA LNVSFPMLMT EFKVTSSTVQ WLTSGVILLT
SMVVILSPWL KKNFTNRSQF IVATVISIVG VLIDAVSNTF VITLFGRLLQ GIGGGVGLPL
MYNVIFEQVP EKKRGTMVGL GSLIISFAPA IGPAFGGYLT QNYGWHMVFW VVLPVQIGSL
ILGWATIKQV STIKKEKLDI IGWLLLSLFF VSGIFVIERI STHGLVNLLS LLMTLAMFVG
IIGYILYAKR VDNPLLSPEI FKFKVFRFGI AAAFVAQIVN LTFNYAIPMV LQIVLLKNPQ
VAGLTLLPGA LSYAMMAIIS GRLYDRYSAR LPITIGVTLM FVGTLLIAFI PINLISLTGG
FMVIQIGAGF WFGNNMTYSV SSVPVEFQSS GNSIFSATTN YSAAVGIALA AGIIATFQKQ
AINVRELASS THIGALWTFR VDIVLIVLAA ILSLSALGSI RK
|
|---|
| |