Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0127 |
Symbol | |
ID | 4422057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 107893 |
End bp | 108531 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639673840 |
Product | hemolysin III-like protein |
Protein accession | YP_817651 |
Protein GI | 116617280 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000707276 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGAT CAAGACGTTT TCAAATTGTT TATGAAGTGC TCAACGCGGT CACGCACGGA TTTGGGTTCA TTTTAGCTGT GATTGCCGGT GTAATGTTGA TGATTCATGT GTTGAGCAAA CCAGTTACCG CATTGACTTT AACTGCGGTT ATCATCTATA TTAGTACGGT TGGTTTTTTT CTACTTGCCT CAACGCTATT TCATTCGCTC GTGTTTACCC GTGCGGCAAA AATCTTTCAA TTTTTTGACC ATGCAGGCAT ATATCTTGTT ATCTTAGGTA GTTACACGCC CTACACATGG TTATTGATCA AGGGCTGGGT TGGCTGGACT ATTTGGGGCG CTATTTTAGC AATGACGATT GCCGGATTTG TTTATGATTT ATTTTTTGTT GGACGATGGC CTTGGGTATC GGTGACGATT TATCTGGTCA TGGGGTGGTT GATTATTCTA GCAATGCCTA TTCTTTGGGG CGTTTTGTCG CATACCGCCT TCTGGTTACT TGTTGCTGGA GGCTTGACCT ATTCGGCGGG AACTATTTTT TATCTTATTC CTAAAATTCC AATGGGTCAT GTTTATTGGC ATCTCTTCGT CTTAGGTGGC GCTGGATTAA TGTTTGCTAG TATCTACATT TCTTTGTAA
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Protein sequence | MQRSRRFQIV YEVLNAVTHG FGFILAVIAG VMLMIHVLSK PVTALTLTAV IIYISTVGFF LLASTLFHSL VFTRAAKIFQ FFDHAGIYLV ILGSYTPYTW LLIKGWVGWT IWGAILAMTI AGFVYDLFFV GRWPWVSVTI YLVMGWLIIL AMPILWGVLS HTAFWLLVAG GLTYSAGTIF YLIPKIPMGH VYWHLFVLGG AGLMFASIYI SL
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