Gene LACR_D29 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D29 
Symbol 
ID4405882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand- 
Start bp34184 
End bp34864 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content39% 
IMG OID639654629 
Producttransposase 
Protein accessionYP_796555 
Protein GI116326635 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000656405 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATT TTAAAGGCAA ACAATTCAAA AAAGACGTCA TTATTGTCGC TGTTGGTTAC 
TACCTGCGTT ACAATCTAAG CTATCGTGAA GTTCAGGAAT TGTTATATGA TCGTGGAATA 
AATGTTTGTC ATACTACGAT TTATCGTTGG GTGCAAGAGT ACAGCAAAGT CCTCTATGAT 
CTTTGGAAGA AGAAAAATAG ACAATCCTTC TATTCATGGA AAATGGACGA AACCTATATC 
AAAATTAAGG GACGTGGGCA TTATCTTTAT CGTGCAATTG ATGCGGACGG CTTAACCTTA 
GATATCTGGT TACGAAAGAA ACGGGATACG CAAGCAGCCT ATGCTTTCTT AAAACGACTC 
CATAAACAGT TTGGTGAGCC GAAAGCAATT GTGACCGATA AAGCACCTTC TCTTGGCTCC 
GCCTTTAGAA AGTTACAGAG TGTGGGTTTA TATACTAAGA CAGATCACCG AACTGTGAAG 
TATCTTAACA ATTTAATAGA ACAAGACCAT CGACCTATTA AACGACGGAA TAAATTTTAT 
CAAAGTCTCC GTACAGCCTC TTCCACGATT AAGGGCATGG AGACCCTTCG AGGAATATAT 
AAAAAGAACC GAAGAAATGG AACGCTCTTC GGCTTTTCGG TGTCTACTGA AATCAAGGGA 
TTAATGGGAA TAACAACCTA A
 
Protein sequence
MNHFKGKQFK KDVIIVAVGY YLRYNLSYRE VQELLYDRGI NVCHTTIYRW VQEYSKVLYD 
LWKKKNRQSF YSWKMDETYI KIKGRGHYLY RAIDADGLTL DIWLRKKRDT QAAYAFLKRL 
HKQFGEPKAI VTDKAPSLGS AFRKLQSVGL YTKTDHRTVK YLNNLIEQDH RPIKRRNKFY 
QSLRTASSTI KGMETLRGIY KKNRRNGTLF GFSVSTEIKG LMGITT