Gene LACR_D07 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_D07 
Symbol 
ID4405899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008506 
Strand
Start bp5532 
End bp6299 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content35% 
IMG OID639654610 
Productlactose transport regulator 
Protein accessionYP_796536 
Protein GI116326616 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AACGACGATT AGAAAAAATT TTAGATATGT TAAAGATTGA TGGGACCATA 
ACCATAAAAG AAATAATAGA TGAACTAGAT ATTTCCGATA TGACAGCCCG TAGAGACCTT
GATGCTCTAG AAGCTGATGG ACTTTTAACA CGTACTCATG GTGGTGCACA ATTGCTTTCC
TCTAAAAAGC CACTTGAAAA GACACATATC GAGAAGAAAA GTCTAAATAC AAAAGAAAAA
ATTGACATTG CTAAAAAAGC CTGCTCTTTA ATCAAAGATG GCGATACTAT TTTTATTGGA
CCCGGAACTA CACTTGTACA ACTGGCATTA GAATTGAAAG GTCGTAAAGG TTATAAAATT
CGTGTCATTA CAAATAGTCT CCCTGTGTTC TTGATTCTAA ATGATAGCGA AACCATTGAT
TTATTGCTTC TTGGCGGTGA ATATAGAGAA ATAACTGGAG CTTTTGTAGG TTCAATGGCT
TCGACAAATT TAAAAGCAAT GAGATTTGCC AAAGCTTTTG TTAGTGCAAA TGCTGTTACC
CATAATTCTA TTGCTACATA TAGTGACAAG GAAGGTGTGA TTCAACAACT TGCCCTAAAC
AATGCTGTAG AAAAATTCTT ATTAGTAGAC AGTACTAAAT TCGATCGATA CGATTTCTTT
AACTTCTACA ATCTAGATCA ACTCGATACC ATCATTACAG ATAACCAGAT TAGCCCTCAA
CACTTAGAGG AATTTAGCCA GTACACTACT ATTTTAAAAG CGGACTAG
 
Protein sequence
MNKKRRLEKI LDMLKIDGTI TIKEIIDELD ISDMTARRDL DALEADGLLT RTHGGAQLLS 
SKKPLEKTHI EKKSLNTKEK IDIAKKACSL IKDGDTIFIG PGTTLVQLAL ELKGRKGYKI
RVITNSLPVF LILNDSETID LLLLGGEYRE ITGAFVGSMA STNLKAMRFA KAFVSANAVT
HNSIATYSDK EGVIQQLALN NAVEKFLLVD STKFDRYDFF NFYNLDQLDT IITDNQISPQ
HLEEFSQYTT ILKAD