Gene LACR_C19 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_C19 
Symbol 
ID4405807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008505 
Strand
Start bp22727 
End bp24526 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content35% 
IMG OID639654560 
Productmaturase MatR 
Protein accessionYP_796487 
Protein GI116326566 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA CAATGGCAAT TTTAGAAAGA ATCAGTAAAA ATTCACAAGA AAATATAGAC 
GAAGTTTTTA CAAGACTTTA TCGTTATCTT TTACGTCCAG ATATTTATTA CGTGGCGTAT
CAAAATTTAT ATTCCAATAA AGGAGCTTCC ACAAAAGGAA TATTAGATGA TACAGCGGAT
GGTTTTAGTG AAGAAAAAAT AAAAAAGATT ATTCAATCTT TAAAAGACGG AACTTACTAT
CCTCAACCTG TACGAAGAAT GTATATTGCA AAAAAGAATT CTAAAAAGAT GAGACCTTTA
GGAATTCCAA CTTTCACAGA TAAATTGATC CAAGAAGCTG TGAGAATAAT TCTTGAATCT
ATCTATGAAC CGGTATTCGA AGATGTGTCT CACGGTTTTA GACCTCAACG AAGCTGTCAC
ACGGCTTTGA AAACAATCAA AAGAGAGTTT GGCGGCGCAA GATGGTTTGT GGAGGGAGAT
ATAAAAGGCT GCTTCGATAA TATAGACCAC GTTACACTCA TTGGACTCAT CAATCTTAAA
ATCAAAGATA TGAAAATGAG CCAATTGATT TATAAATTTC TAAAAGCAGG TTATCTGGAA
AACTGGCAGT ATCACAAAAC TTACAGCGGA ACACCTCAAG GTGGAATTCT ATCTCCTCTT
TTGGCCAACA TCTATCTTCA TGAATTGGAT AAGTTTGTTT TACAACTCAA AATGAAGTTT
GACCGAGAAA GTCCAGAAAG AATAACACCT GAATATCGGG AACTTCACAA TGAGATAAAA
AGAATTTCTC ACCGTCTCAA GAAGTTGGAG GGTGAAGAAA AAGCTAAAGT TCTTTTAGAA
TATCAAGAAA AACGTAAAAG ATTACCCACA CTCCCCTGTA CCTCACAGAC AAATAAAGTA
TTGAAATACG TCCGGTATGC GGACGACTTC ATTATCTCTG TTAAAGGAAG CAAAGAGGAC
TGTCAATGGA TAAAAGAACA ATTAAAACTT TTTATTCATA ACAAGCTAAA AATGGAATTT
AGTGAAGAAA AAACACTCAT CACACATAGC AGTCAACCCG CTCGTTTTCT GGGATATGAT
ATACGAGTAA GGAGAAGTGG AACGATAAAA CGATCTGGTA AAGTCAAAAA GAGAACACTC
AATGGGAGTG TAGAACTCTT TATTCCTCTT CAAGACAAAA TTCGTCAATT TATTTTTGAC
AAGAAAATAG CTATCCAAAA GAAAGATAGC TCATGGTTTC CAGTTCACAG GAAATATCTT
ATTCGTTCAA CAGACTTAGA AATCATCACA ATTTATAATT CTGAATTAAG AGGGATTTGT
AATTACTACG GTCTAGCAAG TAATTTTAAC CAGCTCAATT ATTTTGCTTA TCTTATGGAA
TACAACTGTC TAAAAACGAT AGCCTCCAAA CATAAGGGAA CACTTTCAAA AACCATTTCC
ATGTTTAAAG ATGGAAGTGG TTCGTGGGGC ATCCCGTATG AGATAAAGCA AGGTAAGCAG
CGCCGTTATT TTGCAAATTT TAGTGAATGT AAATCCCCTT ATCAATTTAC GGATAAGATA
AGTCAAGCTC CTGTATTGTA TGGCTATGCC CGGAATACTC TTGAAAACAG GTTAAAAGCT
AAATGTTGTG AATTATGTGG AACATCTGAT GAAAATACTT CCTATGAAAT TCACCATGTC
AATAAGGTCA AAAATCTTAA AGGCAAAGAA AAATGGGAAA TGGCAATGAT AGCGAAACAA
CGTAAAACTC TTGTTGTATG CTTTCATTGT CATCGTCACG TGATTCATAA ACACAAGTGA
 
Protein sequence
MKPTMAILER ISKNSQENID EVFTRLYRYL LRPDIYYVAY QNLYSNKGAS TKGILDDTAD 
GFSEEKIKKI IQSLKDGTYY PQPVRRMYIA KKNSKKMRPL GIPTFTDKLI QEAVRIILES
IYEPVFEDVS HGFRPQRSCH TALKTIKREF GGARWFVEGD IKGCFDNIDH VTLIGLINLK
IKDMKMSQLI YKFLKAGYLE NWQYHKTYSG TPQGGILSPL LANIYLHELD KFVLQLKMKF
DRESPERITP EYRELHNEIK RISHRLKKLE GEEKAKVLLE YQEKRKRLPT LPCTSQTNKV
LKYVRYADDF IISVKGSKED CQWIKEQLKL FIHNKLKMEF SEEKTLITHS SQPARFLGYD
IRVRRSGTIK RSGKVKKRTL NGSVELFIPL QDKIRQFIFD KKIAIQKKDS SWFPVHRKYL
IRSTDLEIIT IYNSELRGIC NYYGLASNFN QLNYFAYLME YNCLKTIASK HKGTLSKTIS
MFKDGSGSWG IPYEIKQGKQ RRYFANFSEC KSPYQFTDKI SQAPVLYGYA RNTLENRLKA
KCCELCGTSD ENTSYEIHHV NKVKNLKGKE KWEMAMIAKQ RKTLVVCFHC HRHVIHKHK