Gene LACR_A06 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_A06 
Symbol 
ID4405786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008503 
Strand- 
Start bp6489 
End bp7649 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content36% 
IMG OID639654530 
Productreplication initiator protein 
Protein accessionYP_796457 
Protein GI116326534 
COG category[L] Replication, recombination and repair 
COG ID[COG5527] Protein involved in initiation of plasmid replication 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0201763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGTA TACCAGAAAA ACAAGAAAAT CAAAAGCAGG TGCTGACCTT GAATGAACTG 
TCAAAAAGAA AAGTGGTAGA GCATAACAGC TTGATTACGT CTATTGCTAA AATGGATAAA 
ACCCCACTGA AAATGTTTGA ATTAGCGGTG TCTTGTATCA ATACCGAAGA GCCACCAAAA 
GACAATATTA TTTATCTCTC AAAGAGAGAC CTTTTCGCTT TCTTTAAAGT ATCCGATAAT 
GACAAGCATA GTCGCTTTAA AGAAGCGATT GAGAAAATGC AAAAACAAGC CTTTTTTCAA 
ATCAAAGAAG AAGCAGGCAA GGGGTTTAAA TTTAAAAGCA TTGTTCCTAT ACCTTACGTG 
GAATGGACAG ATTATCATGA TGAAGTAAAA ATTGAATTTC ATCGTGAAAT TCTGCCTTAC 
TTAATCAATC TTAAAAAGAA TTTTACACAA CACGCTTTGT CAGATATAGC CGAACTCAAT 
AGCAAGTACA GCATTATCTT GTATCGTTGG TTATCCATGA ATTACAACCA ATACGAGCAT 
TACAGCACTA AAGGCGGACG GCGAGCAGAA CAAGTAGAAA GCTACCGAAA TCCGTCTATT 
TCAATTAAAG AATTGCGTAT CATGACTGAT ACCGTAAATG ATTATGAACG GTTTCAGAGT 
TTAGAAACAT GGATATTAAA AAAACCGTTG GAAGAAATCA ATGATCATAC TTCTTTTACC 
GTGACGTATG ACAAAGTCAA AAAGGGGCGC TCGATTGATT CTATCGTTTT TCATATCGAG 
AAGAAACGCC AAGCGGACGA TAACAGCTAC AAAATGGAAG ACCAAGCTTA TCAAACCGAC 
AAAAAAATCA AAGAAGAAAC CGAAGAAAAA CTTGTTTATC AAGCCATGAA AAGTAAATAC 
ACTCAAATTT TATTAGAAAA CATGTTGTTA AGTCCCTATG AAATGACCGA TACGGCACTT 
ATGGCAGGCT TACAGAAAAA CGTTTATCCG CTTTATGACG AACTGAAAGA ATTAAGAGGA 
TTAAAAGGCG TGAAAGACCA CTTGTCTTAC GTTGCCAGCA AACGTGAGGA CTACTCAAAG 
AAAAATATTT GTAAGTACCT TAAAAAAGCC ATTGAACAAT ATCTACCAAC GGTTAAAAGA 
CAGGACTTAA ACCATGAGTG A
 
Protein sequence
MSSIPEKQEN QKQVLTLNEL SKRKVVEHNS LITSIAKMDK TPLKMFELAV SCINTEEPPK 
DNIIYLSKRD LFAFFKVSDN DKHSRFKEAI EKMQKQAFFQ IKEEAGKGFK FKSIVPIPYV 
EWTDYHDEVK IEFHREILPY LINLKKNFTQ HALSDIAELN SKYSIILYRW LSMNYNQYEH 
YSTKGGRRAE QVESYRNPSI SIKELRIMTD TVNDYERFQS LETWILKKPL EEINDHTSFT 
VTYDKVKKGR SIDSIVFHIE KKRQADDNSY KMEDQAYQTD KKIKEETEEK LVYQAMKSKY 
TQILLENMLL SPYEMTDTAL MAGLQKNVYP LYDELKELRG LKGVKDHLSY VASKREDYSK 
KNICKYLKKA IEQYLPTVKR QDLNHE