Gene LACR_A03 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_A03 
Symbol 
ID4405783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008503 
Strand+ 
Start bp4674 
End bp5354 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content37% 
IMG OID639654528 
Producttransposase 
Protein accessionYP_796455 
Protein GI116326532 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.136081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATT TTAAAGGAAA GCAATTTCAG CAGGATGTGA TTATTGTAGC CGTGGGCTAC 
TATCTTCGTT ATAACCTTAG CTATCGTGAA GTTCAAGAAA TCTTATATGA TCGTGGCATT 
AACGTTTCTC ATACGACGAT TTATCGTTGG GTGCAAGAAT ATGGCAAACT ACTCTATCAA 
ATTTGGAAAA AGAAAAATAA AAAATCCTTT TATTCATGGA AAATGGATGA AACGTACATC 
AAAATTAAAG GAAAATGGCA TTATTTGTAT CGAGCCATCG ATGCAGATGG TTTAACCTTG 
GATATTTGGT TACGTAAAAA ACGGGACACA CAAGCAGCCT ATGCTTTTCT TAAGCGGTTA 
GTGAAGCAGT TTGATGAACC GAAGGTTGTA GTCACAGATA AAGCCCCCTC TATTACAAGT 
GCCTTTAAGA AACTAAAAGA ATACGGCTTT TATCAAGGGA CAGAACATCG TACCATTAAA 
TACCTGAATA ATTTGATTGA ACAAGACCAT CGTCCAGTAA AGAGACGCAA TAAATTCTAT 
CGAAGTTTAC GCACTGCCTC TACCACGATT AAAGGCATGG AAGCCATTCG AGGATTATAT 
AAGAAAACCC GAAAAGAAGG CACTCTCTTC GGGTTTTCGG TCTGTACTGA AATCAAGGTA 
TTATTGGGAA TCCCAGCTTA A
 
Protein sequence
MNHFKGKQFQ QDVIIVAVGY YLRYNLSYRE VQEILYDRGI NVSHTTIYRW VQEYGKLLYQ 
IWKKKNKKSF YSWKMDETYI KIKGKWHYLY RAIDADGLTL DIWLRKKRDT QAAYAFLKRL 
VKQFDEPKVV VTDKAPSITS AFKKLKEYGF YQGTEHRTIK YLNNLIEQDH RPVKRRNKFY 
RSLRTASTTI KGMEAIRGLY KKTRKEGTLF GFSVCTEIKV LLGIPA