Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2390 |
Symbol | rplE |
ID | 4433746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 2224715 |
End bp | 2225257 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639668064 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_811949 |
Protein GI | 116513042 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000832727 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATC GTTTGAAAGA AAAATATACT AACGAAGTAG TACCAGCGTT GACTGAACAA TTCAACTACA CTTCAATCAT GGCTGTACCA AAAGTTGATA AAATCGTTAT CAACATGGGT GTTGGAGATG CTGTAAACAA CTCTAAAAAC CTTGATAAAG CTGTTGCTGA ATTGGCTTTG ATCTCTGGTC AAAAACCATT GATTACTAAA GCTAAAAAAT CAGTTGCTGC TTTCCGTCTT CGTGAAGGTA TGCCAATCGG TGCGAAAGTA ACTCTTCGTG GCGAACGTAT GTTCGAATTC TTGGACAAAT TGGTTACTGT TTCACTCCCA CGTGTACGTG ACTTCCACGG TGTTTCAAAC AAAGCGTTTG ATGGTCGCGG TAACTACACA CTTGGTGTGA AGGAACAATT GATTTTCCCA GAAATCAACT ATGATGATGT TGATAAAGTT CGTGGTATGG ACATTGTTAT CGTAACAACT GCTAACACTG ACGAAGAATC ACGTGAATTG CTTGCTAAAC TCGGCATGCC GTTCGCTAAA TAA
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Protein sequence | MTNRLKEKYT NEVVPALTEQ FNYTSIMAVP KVDKIVINMG VGDAVNNSKN LDKAVAELAL ISGQKPLITK AKKSVAAFRL REGMPIGAKV TLRGERMFEF LDKLVTVSLP RVRDFHGVSN KAFDGRGNYT LGVKEQLIFP EINYDDVDKV RGMDIVIVTT ANTDEESREL LAKLGMPFAK
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