Gene LACR_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2375 
Symbol 
ID4434231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp2215689 
End bp2216627 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content38% 
IMG OID639668049 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_811934 
Protein GI116513027 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.631285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGT TTGAAAAACC AAAAATTACT AAATTTGACG AATCAGAAAA TTACGGTAAA 
TTCGTTGTTG AACCACTTGA ACGTGGTTAT GGTACAACTT TAGGTAACTC TCTGCGTCGC 
GTCCTTTTGT CATCACTTCC TGGTGCTGCT GTGACTTCAA TTCAAATTGA AGGTGTTCAA 
CACGAATTCG CAACAATCCC TGGCGTACGT GAAGATGTCA TCCAAATCGT TCTTGCGGTT 
AAAGGAATTG CCATCAAATC ATACGTTGAA TCTGAAAAAC AAATCGAACT TGACGTTACT 
GGTCCTATGG ATGTTACTGC TGGTGATATC TTAACTGATA GCGACATTGA AATTGTCAAC 
AAAGACCATT ACTTGTTCTC TATTGCTGAA GGTCACTCAA TGCGTGCTGT AATGACTGTT 
AAAAAAGGAT ACGGCTATGT TCCGGCTGAC GAAAATAAAG TCGATGGAGC GCCAATTGGC 
ACAATTGCTG TAGACTCAAT TTACACACCA GTAAGTAAAG TAAATTATCA AGTTGAACCT 
GCCCGTGTTG GTGGAGATTC TAGCTACGAT AAATTAACAC TTGAAATTAC TACAAACGGT 
ACTATCGTTT CTGACGAAGC TTTGTCACTC TCAGCTAAAA TCTTGACAGA CCACTTGAAC 
TTGTTCGTTG ATCTTTCAGA AGTTGCAGCT GAAGCTGAAA CACTTGTTGT TAAAGATGAA 
GTTAAAACAG AACGTGTGCT CGATAAAATT ATTGAAGAAA TGGACTTCTC AGTTCGTGCT 
TACAATGGTT TGAAACGTGC AGGTATCAAC ACTGTTACTG ATATTGTTGA AATGAGCGAA 
GCTGACATGA TTAAAGTCAA AAACCTCGGT CACAAATCAG TAGAAGAAGT CAAAGTTAAA 
TTGACTGAAT TGGGACTTTC CCTTAAAAAA AGAAAATAA
 
Protein sequence
MIEFEKPKIT KFDESENYGK FVVEPLERGY GTTLGNSLRR VLLSSLPGAA VTSIQIEGVQ 
HEFATIPGVR EDVIQIVLAV KGIAIKSYVE SEKQIELDVT GPMDVTAGDI LTDSDIEIVN 
KDHYLFSIAE GHSMRAVMTV KKGYGYVPAD ENKVDGAPIG TIAVDSIYTP VSKVNYQVEP 
ARVGGDSSYD KLTLEITTNG TIVSDEALSL SAKILTDHLN LFVDLSEVAA EAETLVVKDE 
VKTERVLDKI IEEMDFSVRA YNGLKRAGIN TVTDIVEMSE ADMIKVKNLG HKSVEEVKVK 
LTELGLSLKK RK