Gene LACR_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2028 
Symbol 
ID4433757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1923118 
End bp1924077 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content41% 
IMG OID639667725 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_811622 
Protein GI116512715 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0890076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAG TAATTATTAG ACGTGTTTTA TTGATGATTC CGCAACTATT TATCCTGAGT 
ATTCTTGTTT TCTTCTTTGC TAAATTGATA CCAGGTGACC CTTTCTCTGG TTTAATTGGG 
CCACATACAG ATCCACACGA AATTGAAGCT TTAAGGCGTG CAGCTGGCCT GTACGACCCT 
TGGTGGGAAC AATATCTCAG ATGGTTGGGA CATGCGATTC ATGGAAATTT GGGGATGTCT 
TATAATCTCA AAGAGCCTGT CACTACTGTC ATTGGTCAAC GAGCGGTTAA TACTTTTTGG 
ATGTCGCTTC TTTCTGTGAT TTTGACCTAT TTATTTGCTG TGCCAATGTC TATCGTTGCA 
GCCCGTCATG AGGGAAAATG GCAAGACCGT TTATGGTTGA CATATAACTC GATTACTTTT 
GGTATTCCAC ATTATGTTTT CTATTTGGTC ATGATTTTTA TCTTTGGTTA TAGTTTAGGC 
TGGTTTCCAA CGGGTGGAAC AGTTAGTCCA AATGCTGTTG GTTTTGTCGC CGTCTTTTTT 
AGTCGAATCT ATCACATGAT TCTTCCGGCT TTTAGCTTGG CAGTTTTTGG AACAGTCGCG 
ATATTCACTT ATTTCCGTTC AGGGATTTTG GATGAAGAAA CGCAGGATTA TGTGCGAACG 
GCGCGAGCTA AAGGAGTGAA GGAAAGAGTG ATTTTCACTC GACATATCTT GAGAAACGCT 
TCACTACCGA TTGCGGCAAA CTTTGGTTTT GTAATTACGG GACTTTTAGG AGGGGCGATA 
TTTGCAGAAA CGATTTTCGG CTATCCTGGT TTGGGTCAAC TTTTTATTAC CTCAATCACT 
GGTCGAGATT ATTCAATGAT TACGGCTCTG ATTTTGTTAA ATGGTTTTCT GGGTTTATTA 
GGGGCCCTTT TGTCAGATAT TATCATGGCA ATTGTTGACC CTCGAATTCG GATTCAGTAA
 
Protein sequence
MWKVIIRRVL LMIPQLFILS ILVFFFAKLI PGDPFSGLIG PHTDPHEIEA LRRAAGLYDP 
WWEQYLRWLG HAIHGNLGMS YNLKEPVTTV IGQRAVNTFW MSLLSVILTY LFAVPMSIVA 
ARHEGKWQDR LWLTYNSITF GIPHYVFYLV MIFIFGYSLG WFPTGGTVSP NAVGFVAVFF 
SRIYHMILPA FSLAVFGTVA IFTYFRSGIL DEETQDYVRT ARAKGVKERV IFTRHILRNA 
SLPIAANFGF VITGLLGGAI FAETIFGYPG LGQLFITSIT GRDYSMITAL ILLNGFLGLL 
GALLSDIIMA IVDPRIRIQ