Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1948 |
Symbol | |
ID | 4432154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1840372 |
End bp | 1840932 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639667647 |
Product | sortase related acyltransferase |
Protein accession | YP_811544 |
Protein GI | 116512637 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.165454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTTTA GACTAGCAAA AAAAGCTGAT GCTCAGCGAC TTTTAGAGAT TTATAGACCA TATGTTGAAA AAATAGCCAT TACTTTTGAG TACGAAGTGC CCACACTAGA AGAATTTGAA AATCGAATTG AAAAAATTGG GAGTCAATTT CCATATCTTT TAGCGATTGA AAATGGTAAA ATCATTGGTT ATGCCTATGC AGGGGCCTAC CGTGAACGGG CGGCTTATGA TTGGGTGGTC GAATTATCAA TTTATTTAGA TGAAAAAGAG CGACAACATG GAGCTGGAAG TGTCCTTTAT CAAAAGTTAC TGACAGCCTT AGCGGCACTC AATTATCAGC GGGCCTATGC TTGTATCACT TATCCAAATC CTGCTAGTGT CGCTTTCCAT GAGAAATTTG GATTTCAACA AATTGGACTT TTCCCCAAGG CTGGTTATAA GTTTGAACAA TGGTATGGAA TTGTTTGGTT AGAATTAGCA CTACAAAAAT CTGACGAGGT AAAGGCTACA AAATTACTGA CAGATTTATC AGAAGAGGAA ATAAAAAAAA TCTTGGAATA A
|
Protein sequence | MEFRLAKKAD AQRLLEIYRP YVEKIAITFE YEVPTLEEFE NRIEKIGSQF PYLLAIENGK IIGYAYAGAY RERAAYDWVV ELSIYLDEKE RQHGAGSVLY QKLLTALAAL NYQRAYACIT YPNPASVAFH EKFGFQQIGL FPKAGYKFEQ WYGIVWLELA LQKSDEVKAT KLLTDLSEEE IKKILE
|
| |