Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1921 |
Symbol | aroE |
ID | 4433895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1816896 |
End bp | 1817756 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639667621 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_811518 |
Protein GI | 116512611 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000576763 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG ACGGTTACAC GCGGATGGCT GCTGTGGTGG CAAACCCTAT TAAACACAGC TTATCTCCTT TTATTCATAA TTTGGCCTTT GATTTAACTG ATGAAAATGG CGTTTATTTA GCTTGGGAAG TTGAGTCCAA AAAATTAGCG GCTATTGTTG AAAATGTTCG TAATTTGGAC ATGTATGGTC TGAATATCTC TATGCCTTAT AAAGGTGAAA TTATTAAATT TATGGATGAA TTGAGCCCAG CGGCCGAACT AATCGGAGCG GTCAATACGG TAGTTAATCA TTCAGGAAAA ATAATCGGAC ATAATACTGA TGGAATCGGA TTTTTCAACA GTTTAAAAAA ATATGATTTT AAGATAGAAA ATAAACAAAT GCTTGTTCTT GGCGGCGGTG GAGCAGCGAT TGCCCTTATT GCTCAAGCAG CTTTATCAGG AGCTAAAAAA ATAGTAGTGG CGGCGAGAAA ATCTGCTTCT TATGACCCTT TAAATGAAAA ACTGGCAAAG CTGTCAGCAA AAACAGGAGT AGAAATTTTC CTGACAGACT TATCTGGAGC TGATAGATTG CAAAAAGAGT TAAATCAGAC AGATTTATTA GTGAATGCAA CTTCTGTCGG AATGGACGGA GCGTCTTTTC CTCTAGAAAA AAGCTTGCTT CTTCCTGACA GACTCTTGGT GGTGGATGCT ATTTATAAAG TAAGAGAAAC ACCATTTTTA CGCTGGGCCA AAGAGCAAGG AGCTCAAACT GAAAATGGGC TCGGTATGCT CATTGGACAG GCGGCGGAAA GCTTTTATTT ATGGACAGGC AAAGAAATGC CTGTGGACAA AATTACATTA GAAATGGAGA GAGAAGTATG A
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Protein sequence | MKIDGYTRMA AVVANPIKHS LSPFIHNLAF DLTDENGVYL AWEVESKKLA AIVENVRNLD MYGLNISMPY KGEIIKFMDE LSPAAELIGA VNTVVNHSGK IIGHNTDGIG FFNSLKKYDF KIENKQMLVL GGGGAAIALI AQAALSGAKK IVVAARKSAS YDPLNEKLAK LSAKTGVEIF LTDLSGADRL QKELNQTDLL VNATSVGMDG ASFPLEKSLL LPDRLLVVDA IYKVRETPFL RWAKEQGAQT ENGLGMLIGQ AAESFYLWTG KEMPVDKITL EMEREV
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