Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1863 |
Symbol | |
ID | 4433492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1760867 |
End bp | 1761856 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639667566 |
Product | phosphotransferase system, mannose/fructose-specific component IIA |
Protein accession | YP_811463 |
Protein GI | 116512556 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00596376 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTATCG GAATTGTTAT TGCGAGCCAT GGTGAATTCG CTGCAGGCAT CAAACAATCT GGTTCTATGA TTTTCGGAGA GCAAGAAAAA GTACAAGTTG TTACTTTTAT GCCTAGCGAA GGACCAACTG ATTTGCATGC TAAAATTGAA GATGCCATCG CAACATTTGA TGCTGAAGAT GAAGTACTTG TCCTTGCTGA CTTATGGAGC GGTTCTCCAT TTAACCAAGC AAGTGCAGTG ATGGGTGAAA ATCCAGAGCG CAAGATCGCT ATCATCACAG GCCTCAACCT GCCTATGCTT ATCCAAGCCT ACACAGAACG CATGATGGAC GCGTCTGCTG GAGTGGATAA AGTCGTAGCA AATATTATGA AAGAAGCCAA AGGCGGTATT AAAGTACTTC CTGAAGAACT TCAACCTGCT GAAGAAACTG CTGTTGCAGC TGCTCCGGCT GCTGTTCAAG GTGCAATCCC AGAAGGAACA GTCATCGGTG ATGGTAAAAT TAAAATTAAC CTCGCTCGTA TTGACTCACG TTTGCTTCAC GGACAAGTTG CAACTGCTTG GACTCCAGAC TCAAGAGCAA ACCGCATCAT CGTTGTTTCT GACACCGTTT CTAAAGATGA ACTTCGTAAG AAACTCATCG AACAAGCGGC CCCAACTGGT GTAAAAGCTA ACGTTATACC AATCAAGAAA ATGATCGAAG TTGCTAAAGA CCCCCGCTTT GGTGACACTA AAGCACTTCT TCTTTTCGAA ACTCCACAAG ATGCTCTTGC AACAATCGAA GGTGGTGTAC CAATTGATAC ATTGAACGTT GGTTCTATGG CTCACTCAAC TGGTAAAACA ATGCTCAACA AAGTTCTTTC TATGGACAAA GATGACGTTG CTACTTTTGA AAAATTGCGT GACCTCGGAG TTAAATTCGA CGTACGTAAA GTTCCGGCTG ATTCTAAATC AGACCTCTTT GGTTTGATTA AAAAAGCTAA CGTACAATAA
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Protein sequence | MSIGIVIASH GEFAAGIKQS GSMIFGEQEK VQVVTFMPSE GPTDLHAKIE DAIATFDAED EVLVLADLWS GSPFNQASAV MGENPERKIA IITGLNLPML IQAYTERMMD ASAGVDKVVA NIMKEAKGGI KVLPEELQPA EETAVAAAPA AVQGAIPEGT VIGDGKIKIN LARIDSRLLH GQVATAWTPD SRANRIIVVS DTVSKDELRK KLIEQAAPTG VKANVIPIKK MIEVAKDPRF GDTKALLLFE TPQDALATIE GGVPIDTLNV GSMAHSTGKT MLNKVLSMDK DDVATFEKLR DLGVKFDVRK VPADSKSDLF GLIKKANVQ
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