| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1761 |
|---|
| Symbol | |
|---|
| ID | 4432660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1670082 |
|---|
| End bp | 1672871 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639667468 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_811368 |
|---|
| Protein GI | 116512461 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4926] Phage-related protein |
|---|
| TIGRFAM ID | [TIGR01665] phage minor structural protein, N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAATA TCTTATTTTT AGATAAGATG CAACAAGTCA TCAAAAGTTA TGATTCCGAT
GAATTCATAG AATGTGTTCA GACAAAAGAA ATCACAACTA ACGCTTCTGA ATTAATGAAT
GACACACTTT CAGTTTCTTT ACATTTTGAT GAAACAATTA AAGATGCCAG CTATATTGCA
GTCAATGATA CGAAAGAACA AGAGTTTTCT TTATATCGAA TTTTAACCGC AAAAGATGAA
GATAATTTAC TTTCATTTGA AGCGATAAAT TTCGCCGTCG ATGAACTGGA TAATTTTATC
ATTAAAGATA TAAGACCTAA AAATAGGTCT TTTTCTTATG TGATTAATCA GCTTTTATCT
GATTCAGGTT GTGACTGGGT ATTAGGTGTC TGTGAACCGA TTAAAACAGT TTCCAGCACC
TTCTACTATA CTTCCATGCG TGAAGCTCTA AAAGCTCTAC AAGAGTTAGG TGCAGAGTTT
ACCTTTTCAA TTGAAATTAC AGGAAATAAG ATTACTAAAA AAATCATTAA CTGCTATAAC
CAAATTGGGA AAATAACCAA TAAGCGATTT GAATATGGAG AAGAAGTTCT AAAAATTGTT
CACCAACAAG ACCGCACAAA TATTGTCACT GCCCTAATTG GACGTGGAAA AGGTGAAGAA
GTTGGGGACG GATACGGACG AAGACTTGAG TTTTCAGATG TCGAGTGGAG AAAGTCAAAT
GGTAAACCAC TTGATAAGCC TAAAGGTCAA AATTGGATTG AATATCCAGA AATGACGAAA
GAATATGGCA TTCCATCAAA CGGAAAAATG TTACCACGTA AAACGGTTGT TGTCTTTGAT
GATGTGGAAG ATGCAAGCGA ACTTTTACAA AAGACCTATG ACCAACTGGC TTATTACTGC
CGGCCACTTG TTCAGTTTAG TACTGAGATA TTAGGCAGTG ATTCAATTGG AAATACTGTT
TCAATCCACA GAGGAGACCG AAATTATCAC TACCAAACCA GAGTCTTTAA AGTAGTTACT
GACCATGTTA ATGGGCGAGT GCAAGCTAGT CTAGGCGATA ATTTAAGTGG AAACTCAATT
AATCGCCAGT TGTCACAAGT TCAAAGCAAT ATCTCTGACC TTGATAATAA TAAAATGACA
TTTTATGACT CCACAGAAAT TGGAAAGTAT CAAGACGATA TTATGCGAGG TGCTGGTGCG
AACGGTGGCT CGATTTACAT GGTCAACGGA ATTGAAGCTG GTGTATCACA ATCAAGAGAG
ACCTATGAGC AAGTCTTTAT GGATGGCCCA AGGATTCAAG ATTCACAGTA TTTCATGATT
CAAAATAATG CTGGAATATC TTTCAAGCAA TGTAAAAAAG GTCAATGGAC GACAATTCAA
GATGTTCATA ATGGCAAAAG TAATACTGCA TGGACACTTG ATGGGACTTT CAATGCTAAC
TTTATTAATG CCGGAGTTTT GCAAGGGGTC AAGATTCGTT CAGTTCATCA TGACTTCATT
ATTGAACTTG ACCAAGGGAA AATTCGTTTT ATTAAAAGAA ATGGGTCGTC CGAAAATGAG
ATGTTTGCTT TTGCGCCAAC TTATACAGGC GGACAACTCC AAGGGATTAA TGCAATTCAA
AATCATGGTT ATTCTTTCGC CTTGTCATCA AAGGGAAACA ACGGAGCGCT TTTAAATGTT
TTAGAAATTC CCAAAGACAG TACGGCTGAA AATCGCAAAT TAAATCTTTA CGGAGAAGTA
AAAGTTGATG GAAATTTAAC AATTAGCGGT AAAACTAATA CCAAAGAACT CTATGTCAAC
GGAACAAAAA TTGATACTAA TGGTGGAGGA AATACAGGAG GCGGAGATAC AGGCTGGAAT
GGTCAATACC CACCAGAAGT CACAAGTGAT CGTGATAAAC GCTACTGGCA AATTTGGGCA
ATGGCGATTG GAGCTGATTT CTCTAAACAA GCTGCAGCTG CTTTACTTGG GAATGCGCAG
GGTGAATCTG ACGCTAACCC AACGGCTGAC GAGGGTGGCG GACGTCCTGG TTTCGGTTAT
GGGGTTTGGC AATGGACGGA TAGTTCTGGC GCTAGCTCTG GACGTGTTTA TATGATTAAC
CTCATGACAC GAGCAGGAGT GACTGACAAT CCTGACACAA TCACAGCCCA ATTCAAGCTC
TTGATGTGGC ATTCACCAAA TGGCCAATGG ATTGCGACAA GCTCTTATCC TTATTCTTGG
ACTCAATTCA TGACATTGAC CAATATCAAT ACTGCAACGC AAGCTTTTGT AGCTAACTTT
GAACGTCCCT TAAACGGACA CCCTGAACGT AGTACTTGGG CCCAAGAATG GTATAACAAA
TTTGTTAATC TTGAAACCCC AAGCGGTGGC GGAGGTTATA TTGCTCCAAT TTCAAGTCCT
ATTACCGTAA CAAGTGAAAT GGGTTGGAGA ACGAGTCCAA TCACCGGAGC GCAAGAATTT
CACAATGCTA TGGACTTGGT TAATGGCAAT CCAACAACTC CAATCTTAGC TTCTGGCGAT
GGTCAAGTGG TCCAAGCGGG AAGTAATTAT TATAACTGGT ATGGAAATTA CACGGTCATC
AAGCATGCGG ATGGACTTTA TACAGGGTAC GCACATCAAA GCAGAATCGA TGTTTCTGTG
GGTCAAAATG TTAAAAAGGG CCAACAAATT GGACTTATGG GAGCGACTGG CCCGGTCACT
GGACCACATT TGCACTTCCA ATTCATGGAC CAATATTGGC CATCATCAAG CGCTCACTTT
AAGAATCCAA GAGATTATAT CAAATTTTAG
|
|---|
| Protein sequence | MSNILFLDKM QQVIKSYDSD EFIECVQTKE ITTNASELMN DTLSVSLHFD ETIKDASYIA
VNDTKEQEFS LYRILTAKDE DNLLSFEAIN FAVDELDNFI IKDIRPKNRS FSYVINQLLS
DSGCDWVLGV CEPIKTVSST FYYTSMREAL KALQELGAEF TFSIEITGNK ITKKIINCYN
QIGKITNKRF EYGEEVLKIV HQQDRTNIVT ALIGRGKGEE VGDGYGRRLE FSDVEWRKSN
GKPLDKPKGQ NWIEYPEMTK EYGIPSNGKM LPRKTVVVFD DVEDASELLQ KTYDQLAYYC
RPLVQFSTEI LGSDSIGNTV SIHRGDRNYH YQTRVFKVVT DHVNGRVQAS LGDNLSGNSI
NRQLSQVQSN ISDLDNNKMT FYDSTEIGKY QDDIMRGAGA NGGSIYMVNG IEAGVSQSRE
TYEQVFMDGP RIQDSQYFMI QNNAGISFKQ CKKGQWTTIQ DVHNGKSNTA WTLDGTFNAN
FINAGVLQGV KIRSVHHDFI IELDQGKIRF IKRNGSSENE MFAFAPTYTG GQLQGINAIQ
NHGYSFALSS KGNNGALLNV LEIPKDSTAE NRKLNLYGEV KVDGNLTISG KTNTKELYVN
GTKIDTNGGG NTGGGDTGWN GQYPPEVTSD RDKRYWQIWA MAIGADFSKQ AAAALLGNAQ
GESDANPTAD EGGGRPGFGY GVWQWTDSSG ASSGRVYMIN LMTRAGVTDN PDTITAQFKL
LMWHSPNGQW IATSSYPYSW TQFMTLTNIN TATQAFVANF ERPLNGHPER STWAQEWYNK
FVNLETPSGG GGYIAPISSP ITVTSEMGWR TSPITGAQEF HNAMDLVNGN PTTPILASGD
GQVVQAGSNY YNWYGNYTVI KHADGLYTGY AHQSRIDVSV GQNVKKGQQI GLMGATGPVT
GPHLHFQFMD QYWPSSSAHF KNPRDYIKF
|
|---|
| |