Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1697 |
Symbol | murD |
ID | 4432537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1604371 |
End bp | 1605720 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639667405 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_809615 |
Protein GI | 116512399 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.35141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAACGAAATT TAAAGATCAA AAAATCTTAG TTCTTGGACT TGCCCGTTCT GGAATGGCTG CTGCTCTTGT GCTCAATGAG TTGGGAGCGA TTGTTACAGT TAATGATGGC AAACCTTTTG AAGAAAATAA AGAAGCTCAA GTACTATTAG AAGAAGGGAT TAAAGTCATC ACAGGAAGTC ACCCGATTGA TTTGTTGGAC GAAGATTTTG CACTGATGGT TAAAAATCCA GGAATTCGTT ATGATAATCC CATGGTTGAG CGAGCAGAAG CTCTAAAAAT TCCAGTGATT ACTGAGGTTG AACTTGCATA TTTAGTGAGT GAGGCACCAA TTATTGGCAT CACAGGAACA AATGGTAAAA CGACAACAAC GACATTAATT GCTGATATTT TAAATGCTGA TGGTCAATCT GCTAAGTTAT CAGGTAATAT TGGTTTTCCA GCGTCAGAAG TTGCCCAAAA AGCTCAAGCT ACTGACACAT TAGTGATGGA ACTTTCAAGT TTCCAATTGA TGGGAATTGA TACTTTCAGA CCTAAAATTG CTTTAATCAC AAATCTTTTT TCTGCTCATT TGGACTACCA TGGTTCACAA GAAGCATATG AAGCTGCTAA ATGGCGGATT CAAGAAAATA TGACAGCAGA TGATTTCCTA ATTCTCAATT TTAACCAAGA AAAATGCCGT AAATTAGCAG ATAAAACAAA GGCAACGGTC CTTGCTTTTT CAACTAAAGA AAAAGTTTCA GGTGCTTATG TTAATGAGGG GAAAATTTAT TTTAAAGATG AATTTATCAT GGAAGCTTCT GAGCTTTCAC TTCCTGGGGA TCATAATTTA GAAAATGCTT TAGCGGCAAT TGTCGCTTCA AAATTACGCG GAGCAGAAAA TGAAGCAATT ATCGAAGTAC TGACAAGTTT TGCAGGTGTA AAACATCGGT TGCAATATCT AGGTGAAATT GATGGACGAA AAGTCTATAA TGACAGTAAA GCAACTAATA TTTTGGCTAC TCAAAAAGCC TTGTCAGGAT TTGACAACAG TAAACTTTGG CTTTTAGCTG GTGGACTTGA CCGAGGCAAT GGCTTTGAAG ATTTAGAAAA AGATTTAGAA GACTTAAAAG GAATGGTTGT CTTTGGACAA ACTGCGGATA AATTGCGGTT GATGGCTGAA AAATTGAATA TTCCTGTGTT TGCTAGTCAA AATGTTGCAA CTGCTCTTAA AGAAATCATG CCTCAAACGC AAGTTGGTGA TACCATTTTA CTTAGCCCAG CTTGTGCAAG TTGGGATCAA TATAAAACCT TTGAAGAACG AGGCGATTTA TTTATCGAGG CTTTTGAGAG CTTAAAATAA
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Protein sequence | MKKITKFKDQ KILVLGLARS GMAAALVLNE LGAIVTVNDG KPFEENKEAQ VLLEEGIKVI TGSHPIDLLD EDFALMVKNP GIRYDNPMVE RAEALKIPVI TEVELAYLVS EAPIIGITGT NGKTTTTTLI ADILNADGQS AKLSGNIGFP ASEVAQKAQA TDTLVMELSS FQLMGIDTFR PKIALITNLF SAHLDYHGSQ EAYEAAKWRI QENMTADDFL ILNFNQEKCR KLADKTKATV LAFSTKEKVS GAYVNEGKIY FKDEFIMEAS ELSLPGDHNL ENALAAIVAS KLRGAENEAI IEVLTSFAGV KHRLQYLGEI DGRKVYNDSK ATNILATQKA LSGFDNSKLW LLAGGLDRGN GFEDLEKDLE DLKGMVVFGQ TADKLRLMAE KLNIPVFASQ NVATALKEIM PQTQVGDTIL LSPACASWDQ YKTFEERGDL FIEAFESLK
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