Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1566 |
Symbol | |
ID | 4434367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1478559 |
End bp | 1479239 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639667281 |
Product | hypothetical protein |
Protein accession | YP_809491 |
Protein GI | 116512275 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.332495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC AAACGATGAC AATAGATGAA AAATTAAATA GTGTTCGTGC AGGAGTTTTA GGGTCTAATG ATGGAATCTT AACGGTGGTT GGTGTACTTT TTTCCGTATC AGCAGCGTCA GGGAGTAGTT TTGCTTTACT GATTGCAAGT TTAGCTAATC TAATTTCTGG TGCTTTTTCA ATGTCATCTG GCGAATACGC TAGTGTCAGT TCACAGTCTG ATAGCGAGAA AGTAGTTGTC CAACAAGAAA AGATATTACT AAATAAAGAT TTTAAAAATC AAAAAGAAGC GATTAAAGAT TTTTATATTG AAAAGGGGAT TAGTTCTGAA ACTTCAATGA AGATTGCTGA TGAATTGCTT GCTCTAAAAC CATTAGAAAC GGTTCTGTCA GTAAAATATG ATATTACTTT GGGACATTAT ATGAACCCTT GGCAAGCGGC TTGGTCATCA TTAATTTCGT TCACCATTGG GGGACTTTTT CCATTACTGA CAATGATTTT AGTGAAAGGG GTTTGGCAAT TTCCAGCGAC GATCTTAGCA ACAATGGTTG CGATGGCTTT AACTGGCATG ATTAGTGCTA AACTTTCTGA TGGCTTGGTG ATTAAAGCGA TTTTCAGAAA TATTATTATT GGGCTGATGA CAATTTTTAT TCATTATTTT ATTGGTCGTA TTTTGGGTTA A
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Protein sequence | MKKQTMTIDE KLNSVRAGVL GSNDGILTVV GVLFSVSAAS GSSFALLIAS LANLISGAFS MSSGEYASVS SQSDSEKVVV QQEKILLNKD FKNQKEAIKD FYIEKGISSE TSMKIADELL ALKPLETVLS VKYDITLGHY MNPWQAAWSS LISFTIGGLF PLLTMILVKG VWQFPATILA TMVAMALTGM ISAKLSDGLV IKAIFRNIII GLMTIFIHYF IGRILG
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