| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1543 |
|---|
| Symbol | |
|---|
| ID | 4433535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1461047 |
|---|
| End bp | 1461667 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639667262 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_809472 |
|---|
| Protein GI | 116512256 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0876912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGATAG CAAGACAGCC AAGATACCAA CAAATTGCCC TGCAAATAGC TGAAAGAATT
GTTCGAAATG AACTTAAGGT TGGACAGAAG ATATATGCCA GATCGACTCT TGCAACAACC
TTTGGTGTCT CACCAGAAAC AGCACGTAAG GCTATAAGCG TCTTAGGAGA TTTGGGAATT
GTTGACCCTG TTCATGGAAG TGGTGTAATT ATTGCATCAA AACAAAAAGC GCAAGAATAT
TTAGCGCAAT ATCAAGAAGT AGAAACAATG CAAGACTTGC GAACACAAAT CATGCAGAGT
GTGGAGAGTC AAAGAAGAGA ATTGGCAAAT TTTTCATCTT TCCTAGATAA ATTGGTTGAT
CAAACTGAAC ATTTTCAAAA AATAAATCCT TTGACCCCGA TTGAATTTGA ACTAGAAAGA
GATTCTGAAA AATTCGGAAT GAGTTTGGGT GAAATGAATC TTTGGCAAAA TACAGGAGCA
ACAGTTGTTG CAATTTTACA GAATGAAGAA TTAATAGTTT CACCGGGTCC TTATGCAACT
TTAAATCAAG GAGATACCTT ATATTTCGTA GGAGCTTCTG ATACAGGACA AATTGTCCAA
AACTTCTTTT ATGGCAACTA A
|
|---|
| Protein sequence | MRIARQPRYQ QIALQIAERI VRNELKVGQK IYARSTLATT FGVSPETARK AISVLGDLGI
VDPVHGSGVI IASKQKAQEY LAQYQEVETM QDLRTQIMQS VESQRRELAN FSSFLDKLVD
QTEHFQKINP LTPIEFELER DSEKFGMSLG EMNLWQNTGA TVVAILQNEE LIVSPGPYAT
LNQGDTLYFV GASDTGQIVQ NFFYGN
|
|---|
| |