Gene LACR_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1542 
Symbol 
ID4433534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1459611 
End bp1460834 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content37% 
IMG OID639667261 
ProductABC-type proline/glycine betaine transport system, ATPase component 
Protein accessionYP_809471 
Protein GI116512255 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4175] ABC-type proline/glycine betaine transport system, ATPase component 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0120779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAGTAA AAGTCAAAAT TGAACATTTA ACTAAAATTT TTGGTAAACG GATTAAAACT 
GCATTGACTA TGGTCGAGCA AGGTGAACCC AAAAATGAAA TTTTGAAAAA AACCGGTGCA 
ACTGTTGGGG TTTATGATAC AAATTTTGAA ATCAATGAGG GAGAAATTTT TGTTATCATG 
GGTTTGTCCG GTTCAGGGAA ATCAACTTTG TTGCGTTTGC TTAATCGATT GATTGAACCA 
ACCAGTGGGA AAATATTTAT CGATGACCAA GATGTTGCCA CTTTGAATAA AGAAGATTTG 
CTTCAAGTTC GCCGTAAGTC AATGAGTATG GTTTTTCAAA ACTTCGGTCT TTTTCCACAT 
CGAACAATTT TAGAAAATAC TGAATATGGT TTAGAAGTTC AAAATGTACC AAAAGAAGAA 
AGACGCAAAC GTGCCGAGAA AGCTTTAGAT AATGCGAACC TTTTAGATTT TAAAGACCAA 
TATCCTAAGC AACTGTCTGG TGGGATGCAA CAACGGGTTG GGCTTGCACG TGCCTTGGCC 
AATGATCCAG AGATTTTGTT AATGGATGAA GCCTTTTCTG CGCTTGATCC ATTAATTCGC 
CGTGAAATGC AAGATGAATT ACTTGAACTT CAAGCTAAAT TCCAAAAAAC AATCATTTTT 
GTTTCCCATG ACTTAAATGA AGCCCTTCGT ATTGGTGATC GTATTGCGAT TATGAAGGAT 
GGTAAAATCA TGCAAATTGG TACGGGTGAA GAAATCTTAA CAAATCCAGC AAACGATTAT 
GTTAAAACTT TCGTTGAAGA CGTAGATCGT GCCAAAGTAA TTACTGCTGA AAATATCATG 
ATTCCAGCCT TAACAACTAA CATTGATGTC GATGGTCCAA GTGTTGCCTT GAAAAAAATG 
AAAACTGAAG AAGTCAGCTC ATTAATGGCT GTTGACAGAA AACGTCAATT CCGTGGGGTT 
GTTACTAGTG AGCAAGCTAT TGCTGCTAGA AAAAACAATC AATCATTGAA AGATGTGATG 
ACAACTGATG TTGGGACAGT CACTAAAGAA ATGCTTGTAA GAGATATCTT GCCAATTATC 
TATGATGCTC CAACTCCATT AGCTGTTGTT GATGATCAAG GCTACTTAAA AGGAATTCTG 
ATTCGGGGAA TTGTCCTAGA AGCATTGGCA GACATTCCTG ATGAAGTAGA AGAAATAGAG 
AAAGAGGAGG AGAAGAATGA TTGA
 
Protein sequence
MPVKVKIEHL TKIFGKRIKT ALTMVEQGEP KNEILKKTGA TVGVYDTNFE INEGEIFVIM 
GLSGSGKSTL LRLLNRLIEP TSGKIFIDDQ DVATLNKEDL LQVRRKSMSM VFQNFGLFPH 
RTILENTEYG LEVQNVPKEE RRKRAEKALD NANLLDFKDQ YPKQLSGGMQ QRVGLARALA 
NDPEILLMDE AFSALDPLIR REMQDELLEL QAKFQKTIIF VSHDLNEALR IGDRIAIMKD 
GKIMQIGTGE EILTNPANDY VKTFVEDVDR AKVITAENIM IPALTTNIDV DGPSVALKKM 
KTEEVSSLMA VDRKRQFRGV VTSEQAIAAR KNNQSLKDVM TTDVGTVTKE MLVRDILPII 
YDAPTPLAVV DDQGYLKGIL IRGIVLEALA DIPDEVEEIE KEEEKND