Gene LACR_1498 details

Gene Information

• Locus tag: LACR_1498
• Symbol: carB
• ID: 4432624
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 1418507
• End bp: 1421701
• Gene Length: 3195 bp
• Protein Length: 1064 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639667219
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_809429
• Protein GI: 116512213
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAC GTAATGATAT CAAAAAAATC ATGATTATCG GTTCAGGTCC AATCATTATC 
GGTCAAGCCG CTGAATTTGA TTACGCTGGA ACGCAAGCCT GTCTTGCTCT TAAAGAAGAA 
GGCTATGAAG TAGTTTTGGT CAATTCAAAT CCAGCAACAA TTATGACTGA CCGAGAAATT 
GCTGACACGG TCTATATTGA ACCTATAACT TTAGAGTTTG TCAGTAAAAT TTTACGTAAA 
GAACGTCCTG ACGCACTCTT ACCAACACTT GGCGGGCAAA CAGGACTCAA CATGGCAATG 
GAATTATCAA AAACAGGAAT TCTTGAGGAG CTTAATGTTG AACTTTTAGG AACAAAATTA 
AGTGCCATTG ACCAAGCAGA AGACCGTGAA CTTTTCAAAG AGCTCTGTGA ATCAATCAAT 
GAGCCTCTTT GTGCCAGCGA TATTGCAACC ACAGTTGAAG AAGCAATTAA CATTGCTGAC 
AAAATTGGCT ATCCAATCAT TGTTCGCCCA GCATTTACTA TGGGAGGAAC AGGAGGCGGA 
ATTTGTGACA CAGAAGAAGA ACTCCGTGAA ATTGTAGCAA ATGGTTTGAA ACTTTCACCT 
GTGACACAAT GTTTGATTGA AGAATCAATC GCAGGTTATA AAGAAATCGA ATATGAAGTT 
ATGCGTGATT CTGCTGACAA TGCTATCGTT GTCTGCAACA TGGAAAACTT TGATCCAGTA 
GGTGTCCACA CGGGCGATTC TATCGTTTTT GCCCCAAGTC AAACCCTGTC TGACAATGAA 
TATCAAATGC TCCGTGATGC TTCGCTCAAT ATCATTCATG CTCTTAAAAT TGAAGGTGGC 
TGTAATGTTC AATTGGCCCT TGATCCGAAC AGCTATGAAT ACCGCGTCAT TGAAGTCAAT 
CCACGGGTCA GCCGTTCATC AGCTTTGGCT TCAAAAGCAA CTGGCTATCC GATTGCCAAA 
ATGTCAGCTA AAATTGCAAT CGGAATGACT CTGGACGAAA TCATCAATCC AGTAACCAAC 
AAAACTTATG CCATGTTTGA ACCAGCCCTT GACTATGTTG TGGCAAAAAT CGCCCGTTTC 
CCATTTGATA AGTTTGAAAA TGGTGACCGC CATTTAGGAA CACAAATGAA GGCAACAGGT 
GAAGTTATGG CAATTGGACG CAACATCGAA GAAAGTCTTC TAAAAGCTGT TCGTTCGCTT 
GAAATTGGCG TTTTCCATAA TGAAATGACT GAAGCGATTG AAGCTGATGA CGAAAAACTC 
TATGAAAAAA TGGTTAAAAC ACAAGATGAC CGACTTTTCT ATGTATCAGA AGCGATTCGT 
TGCGGAATTC CAATCGAAGA AATTGCTGAT TTGACAAAAA TCGATATTTT CTTCCTTGAT 
AAGCTCCTTC ATATCGTTGA AATTGAAAAT CAATTAAAGG TAAATATTTT TGAGCCAGAA 
CTTCTAAAAA CAGCCAAGAA AAATGGATTT TCTGACAGAG AAATTGCCAA GTTATGGAAT 
GTGACGCCAG AAGAAGTTAG ACGTCGTAGA CAAGAAAACA AGATTATTCC TGTTTATAAA 
ATGGTCGATA CTTGTGCAGC CGAGTTTGAA AGTTCAACCC CTTATTTCTA TTCAACTTAT 
GAATGGGAAA ATGAATCTAA ACGCTCAGAT AAAGAAAAAA TAATCGTTCT AGGGTCAGGT 
CCTATCCGTA TCGGACAAGG GGTTGAGTTC GACTACGCAA CGGTACATTG TGTGAAAGCT 
ATCCAAGCAT TGGGTAAAGA AGCCATTGTC ATCAATTCGA ATCCCGAAAC AGTTTCAACA 
GACTTCTCTA TTTCTGATAA ACTCTACTTT GAGCCATTGA CTTTTGAAGA TGTTATGAAT 
GTCATTGACC TTGAAGAACC GCTAGGTGTC ATTGTTCAGT TTGGTGGACA AACGGCCATC 
AATTTGGCAG AGCCATTATC AAAAGCAGGA GTCAAAATCT TAGGAACTCA AGTCGAAGAT 
TTAGACCGAG CTGAAGACCG TGATTTATTT GAGAAAGCAC TGCAAGATTT AGATATTCCA 
CAACCACCAG GGGCGACAGC AACAAATGAA GAAGAAGCGG TCGCTAATGC CAACAAAATT 
GGTTATCCAG TCCTTATTCG TCCCTCATTT GTTTTGGGTG GTCGGGCCAT GGAAATTATT 
AATAATGAAA AAGATTTGCG TGATTATATG AATCGTGCGG TTAAAGCTTC ACCAGAACAT 
CCAGTTTTAG TTGACAGCTA TTTGCAAGGT CAAGAATGTG AAGTTGATGC CATCTGTGAT 
GGAAAAGAAG TTCTTCTTCC AGGAATTATG GAACATATTG AGCGTGCTGG AGTCCACTCG 
GGCGATTCGA TGGCAGTTTA CCCACCACAA AATCTCTCTC AAGCTATCAT TGATACAATC 
GTTGATTATA CCAAACGCCT TGCGATTGGA TTAAATTGCA TAGGAATGAT GAATATTCAG 
TTCGTTATCT ATGAAGAACA AGTATATGTG ATTGAAGTTA ATCCTCGCGC TTCACGTACT 
GTTCCCTTTT TATCAAAAGT TACCAATATC CCAATGGCAC AATTGGCAAC CCAAATGATT 
TTAGGTGAAA ACTTGAAAGA CTTAGGTTAT GAAGCAGGAC TTGCCCCTAC ACCTGATATG 
GTTCACGTTA AAGCACCCGT CTTTAGTTTC ACAAAATTGG CAAAAGTAGA TAGCCTACTT 
GGTCCAGAAA TGAAATCAAC CGGTGAAGCA ATGGGTTCAG ATGTGACACT TGAAAAAGCG 
CTCTATAAAT CATTTGAAGC AGCAAAACTT CATATGGCTG ATTATGGTTC AGTTTTGTTC 
ACAGTCGCTG ATGAGGATAA AGAAGAAACC TTAGCGTTTG CTAAAGATTT TGCCGAAATT 
GGTTATTCAT TAGTTGCTAC CGCAGGAACA GCAGCCTTTC TTAAAGAAAA CGGACTTTAT 
GTGCGCGAAG TGGAAAAACT TGCTGGTGGA GAAGATGAGG AAGGAACGCT TGTTGAAGAT 
ATTCGTCAGG GACGAGTTCA AGCCGTTGTC AATACCATGG GTAATACGCG AGCTTCATTA 
ACAACAGCCA CTGATGGTTT CCGCATTCGA CAAGAAGCAA TCAGCCGAGG AATTCCTCTC 
TTTACTTCGC TAGATACAGT TGCAGCAATT CTTAAGGTGA TGCAAAGTCG TAGTTTTACA 
ACAAAAAATA TATAA 

 

Protein sequence

MPKRNDIKKI MIIGSGPIII GQAAEFDYAG TQACLALKEE GYEVVLVNSN PATIMTDREI 
ADTVYIEPIT LEFVSKILRK ERPDALLPTL GGQTGLNMAM ELSKTGILEE LNVELLGTKL 
SAIDQAEDRE LFKELCESIN EPLCASDIAT TVEEAINIAD KIGYPIIVRP AFTMGGTGGG 
ICDTEEELRE IVANGLKLSP VTQCLIEESI AGYKEIEYEV MRDSADNAIV VCNMENFDPV 
GVHTGDSIVF APSQTLSDNE YQMLRDASLN IIHALKIEGG CNVQLALDPN SYEYRVIEVN 
PRVSRSSALA SKATGYPIAK MSAKIAIGMT LDEIINPVTN KTYAMFEPAL DYVVAKIARF 
PFDKFENGDR HLGTQMKATG EVMAIGRNIE ESLLKAVRSL EIGVFHNEMT EAIEADDEKL 
YEKMVKTQDD RLFYVSEAIR CGIPIEEIAD LTKIDIFFLD KLLHIVEIEN QLKVNIFEPE 
LLKTAKKNGF SDREIAKLWN VTPEEVRRRR QENKIIPVYK MVDTCAAEFE SSTPYFYSTY 
EWENESKRSD KEKIIVLGSG PIRIGQGVEF DYATVHCVKA IQALGKEAIV INSNPETVST 
DFSISDKLYF EPLTFEDVMN VIDLEEPLGV IVQFGGQTAI NLAEPLSKAG VKILGTQVED 
LDRAEDRDLF EKALQDLDIP QPPGATATNE EEAVANANKI GYPVLIRPSF VLGGRAMEII 
NNEKDLRDYM NRAVKASPEH PVLVDSYLQG QECEVDAICD GKEVLLPGIM EHIERAGVHS 
GDSMAVYPPQ NLSQAIIDTI VDYTKRLAIG LNCIGMMNIQ FVIYEEQVYV IEVNPRASRT 
VPFLSKVTNI PMAQLATQMI LGENLKDLGY EAGLAPTPDM VHVKAPVFSF TKLAKVDSLL 
GPEMKSTGEA MGSDVTLEKA LYKSFEAAKL HMADYGSVLF TVADEDKEET LAFAKDFAEI 
GYSLVATAGT AAFLKENGLY VREVEKLAGG EDEEGTLVED IRQGRVQAVV NTMGNTRASL 
TTATDGFRIR QEAISRGIPL FTSLDTVAAI LKVMQSRSFT TKNI