| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1469 |
|---|
| Symbol | |
|---|
| ID | 4433578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1390265 |
|---|
| End bp | 1391200 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639667191 |
|---|
| Product | dihydroorotate dehydrogenase 1B |
|---|
| Protein accession | YP_809401 |
|---|
| Protein GI | 116512185 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0123797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA ACAATCGTCT GTCAGTAAAA TTACCTGGAC TTGACTTTAA AAATCCAATT
ATCCCAGCAT CAGGTTGTTT TGGTTTTGGC GAAGAATATG CGAAATATTA TGATTTGAAC
AAATTGGGTT CAATCATGGT TAAGGCGACG ACTCTTCATC CTCGTTTTGG AAATCCAACA
ACACGTGTGG CTGAAACAGC GAGTGGCATG CTTAATTCCA TTGGGCTGCA AAATCCGGGA
TTAGAAGTCA TAATGTCAGA AAAACTTCCT TGGCTCAACG AAAATTTTCC AGAGTTACCA
ATTATTGCCA ATGTAGCAGG TTCTGAAGAA GCTGATTATG TGGCTGTATG TGCCAAAATT
GGTGATGCAG CAAATGTTAA AGCCATCGAA TTAAATATTT CATGTCCAAA TGTCAAGCAT
GGTGGGCAAG CCTTTGGAAT TGACCCAGAA GTTGCGGCGG ATCTAGTTAA AGCTTGTAAA
GCGGTAAGTA AGGTGCCTTT GTATGTGAAA CTTTCACCTA ATGTGACTGA TATTGTTCCG
ATTGCAAAAG CAGTAGAGGC AGCGGGTGCT GATGGTCTAA CCATGATTAA TACACTCATG
GGCGTACGTT TTGATTTGAA AACTCGTCAG CCGATTTTAG CCAATATCAC AGGAGGCTTA
TCAGGGCCAG CCATCAAACC AGTTGCACTC AAACTTATTC ATCAAGTGGA GCAGGTCGTT
GATATTCCAA TCATTGGAAT GGGCGGTGTG GCCAACGCTC AAGATGTTTT AGAAATGTAT
ATGGCTGGAG CGTCAGCTGT TGCGGTGGGT ACTGCGAATT TTGCTGACCC ATTTGTTTGT
CCCAAAATTA TTGATAAATT ACCAGAGCTT ATGGACCAGT ACGGGATTGA AAGTTTAGAA
AGCTTGATTC AAGAAGTAAA AGAAGGCAGA AAATAA
|
|---|
| Protein sequence | MTENNRLSVK LPGLDFKNPI IPASGCFGFG EEYAKYYDLN KLGSIMVKAT TLHPRFGNPT
TRVAETASGM LNSIGLQNPG LEVIMSEKLP WLNENFPELP IIANVAGSEE ADYVAVCAKI
GDAANVKAIE LNISCPNVKH GGQAFGIDPE VAADLVKACK AVSKVPLYVK LSPNVTDIVP
IAKAVEAAGA DGLTMINTLM GVRFDLKTRQ PILANITGGL SGPAIKPVAL KLIHQVEQVV
DIPIIGMGGV ANAQDVLEMY MAGASAVAVG TANFADPFVC PKIIDKLPEL MDQYGIESLE
SLIQEVKEGR K
|
|---|
| |