Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1415 |
Symbol | rnhB |
ID | 4434338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1328883 |
End bp | 1329659 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639667142 |
Product | ribonuclease HII |
Protein accession | YP_809352 |
Protein GI | 116512136 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000335536 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGACAGA CTATTAAAGA AATTAAGGCA CGGTTAGCTG AACTGACAGA CTTGTCAGCA AAAGAATTTT TAGAATTTGA AACAGACGAA CGTGCAGGAG TTCAAGCAGC TCTGAAAAGT AGAAAAAAAC AAATTTTAGC AGAATGCGCA GAAGATGAAC GTTTGGAACA AATGTTAGAA TTTGAGAAAG AACTTTATAG TCAAGAAATT GAACTAATTG CAGGGATTGA TGAAGTTGGA CGTGGCGCCC TTGCTGGTCC TGTGGTCACA GCTGCAGTAA TTTTGCCAAA GAATTGTAAA ATTCGTGGTT TGAATGATAG TAAAAAAGTG CCAAAATCAA AGCATCATGC TATTCTATCT GAAATTCAAG AAAAAGCGCT AGCGATTGGA ATTGGTATTG TTGATGCCGA AAAAATTGAT GAAGTAAATA TTTATGAGGC GACAAAAATT GCAATGATTC AAGCAGTATC AAAATTATCT CTTAAACCTG AACATCTCTT AATAGATGCG ATGGTTTTAG ATTTGCCCAT TGCTCAGACG AAAATCATTC ATGGAGATGC TCGTTCAGCT TCAATTGCGG CCGCATCAAT TGTAGCTAAA GTGACTCGTG ATGAAATGAT GAAGGATTTC GCTTTAGAAT TTCCAGAATA TGATTTTGAA CATAATGCAG GCTATGGAAC AGCAAAACAT CTTGCAGCTC TGACAAAATA TGGTATCACA AGAATTCATC GGAAATCCTA TGAACCAATT AAATCGATGG TCAACTTCAA ATATTAG
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Protein sequence | MGQTIKEIKA RLAELTDLSA KEFLEFETDE RAGVQAALKS RKKQILAECA EDERLEQMLE FEKELYSQEI ELIAGIDEVG RGALAGPVVT AAVILPKNCK IRGLNDSKKV PKSKHHAILS EIQEKALAIG IGIVDAEKID EVNIYEATKI AMIQAVSKLS LKPEHLLIDA MVLDLPIAQT KIIHGDARSA SIAAASIVAK VTRDEMMKDF ALEFPEYDFE HNAGYGTAKH LAALTKYGIT RIHRKSYEPI KSMVNFKY
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