| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1354 |
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| Symbol | |
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| ID | 4432098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1263164 |
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| End bp | 1264534 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639667087 |
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| Product | tRNA (uracil-5-)-methyltransferase related enzyme |
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| Protein accession | YP_809297 |
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| Protein GI | 116512081 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.452487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGA CAAATTTCAA GAAAAACGAT ATATTTGAAG CAGAAGTCCT TGATTTGACA
CATGAAGGGC AAGGAGTGGT TAAAGTTGAT TCTTACCCAT TTTTTGTAGA CAATGCCTTA
CCTGGTGAAC GGATAAAAAT GCGTGTTCTT AAAGTTGGAA AATCATTTGG TTTTGGGCGT
GTGGATGAAT TTATAAGCCA AAGTGAGCAT CGCACGACTC AGTTAAATCT TGATTATTTA
AGAACTGGGA TTGCTGACTT TGGTCATCTG ACTTATAATG AACAAGTAAA ATTTAAACAA
AAGCAAGTCG TTGATATTTT AAGAAAAACG GCTGGGAAGG AAGATTTCCC TGTTTCTCCA
GTTATCGAAT CTATTAAAAC GATAAAATAT CGAAATAAGG CACAGATTCC TATTCAAATG
GTTAATGGGA TTTTAACTAC TGGATTTTAT AGAAAAAATT CTCACTCATT AATTCCAGTC
GAAGATTTTT ATATTCAACA TCCTGAAATT GATGCAGTTG TCCTTTTTTT GCGTGATGAG
TTTCGGAAAA TTAATTTACA AGCTTACGAT GAAAAAACGC GCAAAGGTTG GCTACGAAAT
ATTGTGGTTA GAAGAGGTTT TCATACAAGT GAAATGATGG TTAGCCTTGT TGTAACCAGT
AAAAAACTCC CAGAAAATGT TGATTTGGTA ATTGACAAAT TAGTGGAGCA TTTTACTAAT
ATTAAATCTG TTCAACTCAA TATTAATAAT GGAACTGGCT CATTTATTTT AGGTAAAGAG
TTCGTTTTAT TGTATGGAAA AGATTTTATT ACAGATTTGA TGTTGGACAA AACTTATCAA
ATTTCTGCAC CGGCTTTTTA TCAAGTCAAC ACTCCACAAG CTGAAAAACT TTATGAAACA
GCCTTTGAAT TCGCAGAATT AAAACCAGGA GATATTGTTA TCGATGCTTA TTCTGGTATT
GGAACAATCG GAATCAGCAT GGCTGATCGA GTCGCTGAGG TTTATGGGAT GGAAGTTGTT
CCGGCTGCTG TTGAAAATGC AAAACGTAAT GCTCAATTAA ATGAACTTGA GAACACACAT
TATGAAGTAG GAACAGCAGA AAAAATTATG CCCAAGTGGC TTGATGAAGG AATAAAACCT
GATGTTATTT TTGTTGACCC ACCAAGAAAA GGGCTCGATG AAACTTTTAT TAAATCAGCA
ACAGCAACTA ATCCTCGGAG AATCGTTTAT ATTTCATGTA ATCCTGCAAC CTTTGCTCGA
GATGTTGTAC GTTTTGAAAA CGAAGGCTAT ATTTTAGATA AAGTTCAACC AGTTGATTTA
TTCCCACAAA CGCATCATAT TGAACTTGTT GCTCGCTTTA ATAAAAAATA A
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| Protein sequence | MDMTNFKKND IFEAEVLDLT HEGQGVVKVD SYPFFVDNAL PGERIKMRVL KVGKSFGFGR
VDEFISQSEH RTTQLNLDYL RTGIADFGHL TYNEQVKFKQ KQVVDILRKT AGKEDFPVSP
VIESIKTIKY RNKAQIPIQM VNGILTTGFY RKNSHSLIPV EDFYIQHPEI DAVVLFLRDE
FRKINLQAYD EKTRKGWLRN IVVRRGFHTS EMMVSLVVTS KKLPENVDLV IDKLVEHFTN
IKSVQLNINN GTGSFILGKE FVLLYGKDFI TDLMLDKTYQ ISAPAFYQVN TPQAEKLYET
AFEFAELKPG DIVIDAYSGI GTIGISMADR VAEVYGMEVV PAAVENAKRN AQLNELENTH
YEVGTAEKIM PKWLDEGIKP DVIFVDPPRK GLDETFIKSA TATNPRRIVY ISCNPATFAR
DVVRFENEGY ILDKVQPVDL FPQTHHIELV ARFNKK
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