| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1346 |
|---|
| Symbol | |
|---|
| ID | 4432090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 1253585 |
|---|
| End bp | 1254475 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639667079 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_809289 |
|---|
| Protein GI | 116512073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000526235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATA ATAGCACACT TCCAAAAGTT TTTGTTTATT TACTGACAAC CATTGAGACG
CTTTATCAAA CGAGGGTTCC CCTTGAGGTT CAAAACCGAA AGAACGTCCA TCTCGCAACA
TCAGATTGCT TAGTTATCGC TTGTTACCTA TGGGGCGTAC TGCATTTTAG TGAAACGCTT
AAAGCTAAGC ACCAACTTGC TCAAAGTTTA TTTCCTAATT TCCTAGAATA TTCTCGCTTT
GTCCGCCGTT GTAATGCCCT CTTACCGAGT ATCCAAGTCA TTCGCCAAGC ACTCGTCTTT
AAAGAGGTTG AAGGAATTAG TGTATCCATT ATTGACAGCT TCCCCATTCC TTTGTGTCAG
CCTATTCGTA ATTTCAGAAG CAAAGTTCTT GGAGATTATG CAAATGTTGG CTACAATGCT
ACAAAGAGAC AGTACTTCTA TGGATGTAAA TGTCATGCTT TAGTCAGTGA ATCAGGCTAT
GTCATAGACT ACACAATTAC TCCTGCTTCA ATGGCTGATA GTTCAATGAC CGAGGAAGTG
TTGAGTCAAT TTGGGACACC AACAGTCCTT GGAGATATGG GATATCTAGG TCAGTCACTG
CATGATAGGC TGGAATTAAA AGGAATTGAT CTAATGACAC CTGCCAGGAA GAACATGAAG
CAAAAGAAAA TCCTTTTCCC TAATTTTTTA AAACGTAGAA AAGTGATTGA GCGAGTTTTC
TCTTTTTTGA CAAATCTAGG AGCTGAGCGT TGTAAAAGTC GTTCGCCTCA AGGTTTTCAA
TTGAAATTAG AGATGATACT TTTAGCGTAT TCTTTACTGT TAAAATCAGC TAAATCACTG
GAACCAGAGA CTTTAAGATA TTCTATCGGG TATCAAGTCA TGGCTAAATA A
|
|---|
| Protein sequence | MTYNSTLPKV FVYLLTTIET LYQTRVPLEV QNRKNVHLAT SDCLVIACYL WGVLHFSETL
KAKHQLAQSL FPNFLEYSRF VRRCNALLPS IQVIRQALVF KEVEGISVSI IDSFPIPLCQ
PIRNFRSKVL GDYANVGYNA TKRQYFYGCK CHALVSESGY VIDYTITPAS MADSSMTEEV
LSQFGTPTVL GDMGYLGQSL HDRLELKGID LMTPARKNMK QKKILFPNFL KRRKVIERVF
SFLTNLGAER CKSRSPQGFQ LKLEMILLAY SLLLKSAKSL EPETLRYSIG YQVMAK
|
|---|
| |