Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1304 |
Symbol | |
ID | 4433939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1212752 |
End bp | 1214878 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639667042 |
Product | DNA topoisomerase I |
Protein accession | YP_809252 |
Protein GI | 116512036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.01574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACTT CAACTAAAAC TAAAACTAGT ACAAAGAAAA AAACAACACG AAAGAAAGTG ACTCCTGGGA AAAATCTCGT AATTGTCGAA TCGCCTGCTA AAGCCAAAAC AATTGAAAAA TATCTTGGAC GAAACTATAA AGTTGTTGCT TCTGTCGGTC ATATTCGTGA TTTAAAAAAA TCAACGATGT CTGTTGATAT CGAGAATGAT TATGAACCAC AATATATCAA TATTCGAGGT AAGGCACCTC TAATCAACTC ACTCAAAAAA GAAGCCAAAG CTGCCAAAGC TGTCTATCTC GCGAGTGACC CGGACCGTGA AGGAGAAGCA ATTTCATGGC ACTTAGCTCA CATCTTGAAT CTTCCACTCG AAGAAAAAAA CCGTGTGGTC TTCAACGAAA TTACTAAAGA CGCCGTAAAA AACGCCTTTA AGGAACCACG TCAAATTGAT GTAGATTTGG TTGATGCCCA ACAAGCACGT CGCGTTCTTG ACCGCCTAGT TGGATATTCA ATCAGTCCAA TTCTTTGGAA AAAGGTCAAA AAAGGACTTT CTGCAGGTCG AGTTCAATCG ATTGCTTTAA AATTAATCGT TGACCGCGAA AATGAAATTA ATGCCTTTAT CCCAGAAGAA TACTGGTCAA TTGATGGGGA ATTCAAAAAA GGAACCAAGA AATTTAATGC TTCATTTTGG GGAATTGATG GAAAAAAACA TCCATTAAAA AATAACGAAG ATGTTATTAA AGTGATGGAG CGTTTAGACG GTCCTGATTT CAATGTCGAT AAAGTTGAAA AGAAAGAACG TCGTAGAAAT TCACCACTCC CTTATACAAC AAGTTCAATG CAACAAGATG TAGCAAATAA GCTTAAATTT CGTACCCGTA AAACAATGAT GGTTGCCCAA CAGCTTTATG AAGGATTGAC ACTCGGAAGT CAAGGACATC AAGGTCTGAT TACCTATATG CGTACCGACT CAACACGTAT TTCTCCAGTC GCACAAAGTG CAGCTCATAG CTATATTGCG GAACAATTTG GCGAAAAGTA CAGCAAGCAC GGTTCAAAAG TTAAGAATGC CTCTGGTGCT CAAGATGCCC ACGAAGCCAT TCGACCTTCA AATGTCTTTA ATACACCTGA GTCCATTGCT AAATATTTGG ACAAAGACCA ATTAAAACTC TATACACTTA TTTGGAATCG TTTTGTTGCT AGCCAAATGG TTGCAGCCAT TTTTGATACT GTGAAAGTGA ACCTTTCACA AAATGGTGTC ATTTTTATCG CCAATGGTTC ACAGGTCAAA TTCGACGGTT ATCTTAGAAT CTACAACGAC TCCGATAAAT CAAATATGCT TCCAGAAATG GAAGAAAACG AGACAGTGAA AAAAGCAAAT GTTAAACCAG AACAACACTT CACACAACCA CCGGCTCGAT ATTCTGAAGC AACACTCATT AAAACATTAG AAGAAAACGG TGTAGGCCGT CCCTCAACCT ATGCTCCAAC CTTAGAAACA ATTCAAAAAC GCTATTATGT AAGATTATCA GCAAAACGAT TTGAACCTAC GGAACTTGGA GAAATCGTTA ACAAGTTGAT TGTTGAATTT TTCCCTAACA TTGTTAATAC CGAATTCACT GCCGAAATGG AAAAAGATCT TGATCAGGTT GAAGAAGGAA AACGCCAATG GATTGAGGTT GTTGACCAAT TCTACAAACC TTTTGCTAAA GAACTTGAAA ATGCTGAAGA AGGTATGGAG AAGATTCAAA TCAAGGATGA ACCCGCTGGT TTTGATTGTG ATGTGTGTGG AAGTCCAATG GTCATTAAAT TAGGACGTTT CGGTAAGTTT TATGCTTGTA GTAACTTCCC AGATTGCCGA AATACCAAGG CTATCGTGAA AGAAATTGGC GTAAAATGTC CACTTTGTCA TGAAGGAAAC ATTATTGAAC GTAAAACTAA GAAAAATAGA ATTTTCTATG GTTGTGACCG CTATCCTGAA TGTGAATTTA CAAGCTGGGA CAAACCAATT GGACGTGATT GTCCTAAATC TGGTCATTTT CTCGTTGAAA AGAAAGTTCG TGGTGGTGGT AAACAAGTCG TGTGTTCAAA TGACGAGTGT GACTATCAAG AAGAAAAACA AAAATAA
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Protein sequence | MPTSTKTKTS TKKKTTRKKV TPGKNLVIVE SPAKAKTIEK YLGRNYKVVA SVGHIRDLKK STMSVDIEND YEPQYINIRG KAPLINSLKK EAKAAKAVYL ASDPDREGEA ISWHLAHILN LPLEEKNRVV FNEITKDAVK NAFKEPRQID VDLVDAQQAR RVLDRLVGYS ISPILWKKVK KGLSAGRVQS IALKLIVDRE NEINAFIPEE YWSIDGEFKK GTKKFNASFW GIDGKKHPLK NNEDVIKVME RLDGPDFNVD KVEKKERRRN SPLPYTTSSM QQDVANKLKF RTRKTMMVAQ QLYEGLTLGS QGHQGLITYM RTDSTRISPV AQSAAHSYIA EQFGEKYSKH GSKVKNASGA QDAHEAIRPS NVFNTPESIA KYLDKDQLKL YTLIWNRFVA SQMVAAIFDT VKVNLSQNGV IFIANGSQVK FDGYLRIYND SDKSNMLPEM EENETVKKAN VKPEQHFTQP PARYSEATLI KTLEENGVGR PSTYAPTLET IQKRYYVRLS AKRFEPTELG EIVNKLIVEF FPNIVNTEFT AEMEKDLDQV EEGKRQWIEV VDQFYKPFAK ELENAEEGME KIQIKDEPAG FDCDVCGSPM VIKLGRFGKF YACSNFPDCR NTKAIVKEIG VKCPLCHEGN IIERKTKKNR IFYGCDRYPE CEFTSWDKPI GRDCPKSGHF LVEKKVRGGG KQVVCSNDEC DYQEEKQK
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