Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1272 |
Symbol | clpX |
ID | 4432411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1180685 |
End bp | 1181920 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639667012 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_809222 |
Protein GI | 116512006 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0015948 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATA CACAAAATCC AAATATTCAT TGCTCTTTCT GCGGAAAGAG TCAAGATGAT GTAAAAAAGA TGATTGCCGG TTCAGATGTT TATATCTGTA ACGAATGTAT CGAACTTTCA ACTCGTATCT TGGAAGAAGA ATTAAAAGAA GAACAAGATT CAGAGATGCT TGAAGTTAAG ACGCCAAAAG AAATGTTTGA CCATTTGAAT GAATACGTTA TTGGTCAAGA AAAGGCCAAA CGTGCGCTTG CAGTTGCGGT TTATAATCAT TATAAAAGAA TTAATTTTAC AGCAAGTAAA ATTGCTGAAG ATATTGAGCT TCAAAAATCA AATATCTTAC TCATTGGTCC AACAGGTTCA GGAAAGACTT TCCTTGCACA GACTTTAGCA AAATCACTCA ATGTTCCTTT TGCCATTGCT GATGCGACAA GTTTGACTGA AGCAGGTTAT GTGGGAGAAG ATGTTGAAAA TATTCTCTTA AAACTTTTGC AAGCCAGTGA CTTTAATATC GAACGTGCCG AACATGGAAT TATTTACATT GATGAAATCG ATAAGATTGC TAAAAAATCT GAAAATGTTT CAATCACTCG TGATGTTTCG GGTGAAGGAG TTCAACAAGC CCTTCTAAAA ATTATTGAAG GAACAGTTGC CAGTGTTCCA CCACAAGGTG GACGTAAACA CCCTAATCAA GAAATGATTC AAATAGACAC CAAAAATATT TTGTTTATTG TTGGTGGGGC TTTTGATGGA ATTGAAGAAA TTGTCAAACA ACGTTTGGGT GAAAAAATCA TTGGTTTTGG TGCCAATAAT AAAAAATTGA GCGATGAAGA TTCTTATATG CAAGAAATTA TCGCTGAGGA TATTCAAAAG TTTGGGTTGA TTCCTGAATT TATTGGACGT CTTCCGATTG TAGCTGCCTT AGAACGCTTA ACTGAAGAAG ACTTAATTCA AATTTTGACA GAGCCTAAAA ATGCTTTGAT TAAACAATAT AAACAACTTT TGTTATTTGA TAATGTTGAA CTTGAATTTA AAGATGGAGC TCTTATGGCT ATTGCGAAAA AAGCAATTGA GCGTAAAACA GGTGCGCGTG GGCTTCGTTC AATTATTGAA GAAGTGATGA TGGATATTAT GTTTGAAGTT CCAAGTCATG AAGAAATTAC AAAAGTTATC ATTACTGAAG CAGTTATTGA CGGAAAAGCT GAGCCAGAAA TGATTCGAGA GGCCGATAAA AAATGA
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Protein sequence | MSNTQNPNIH CSFCGKSQDD VKKMIAGSDV YICNECIELS TRILEEELKE EQDSEMLEVK TPKEMFDHLN EYVIGQEKAK RALAVAVYNH YKRINFTASK IAEDIELQKS NILLIGPTGS GKTFLAQTLA KSLNVPFAIA DATSLTEAGY VGEDVENILL KLLQASDFNI ERAEHGIIYI DEIDKIAKKS ENVSITRDVS GEGVQQALLK IIEGTVASVP PQGGRKHPNQ EMIQIDTKNI LFIVGGAFDG IEEIVKQRLG EKIIGFGANN KKLSDEDSYM QEIIAEDIQK FGLIPEFIGR LPIVAALERL TEEDLIQILT EPKNALIKQY KQLLLFDNVE LEFKDGALMA IAKKAIERKT GARGLRSIIE EVMMDIMFEV PSHEEITKVI ITEAVIDGKA EPEMIREADK K
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