Gene LACR_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1096 
Symbol 
ID4434046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1036757 
End bp1037881 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content33% 
IMG OID639666842 
Productintegrase 
Protein accessionYP_809053 
Protein GI116511837 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.077251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAT ATCAAAAGCG TGGAAAAACT TGGCAGTATT CAATATCAAG AACAAAACAA 
GGACTTCCTC GTCTAACAAA AGGTGGTTTT TCTACAAAGT CCGATGCACA AGCTGAAGCA 
ATGGATATTG AAAGCAAACT AAAAAAAGGA TTTATTGTTG ACCCCATTAA GCAAGAAATT 
TCCGAATATT TTAAAGACTG GATGGAACTT TATAAGAAAA ATGCAATTGA TGAAATGACT 
TATAAAGGTT ATGAGCAAAC GTTAAAATAT TTAAAAACCT ATATGCCAAA TGTTTTAATT 
TCCGAAATAA CAGCATCTTC TTATCAAAGA GCGCTAAATA AATTTGCTGA AACACACGCC 
AAAGCATCTA CAAAAGGGTT TCATACTAGA GTTAGAGCAT CTATTCAACC ACTCATTGAA 
GAGGGACGAC TGCAAAAAGA TTTTACCACT CGTGCAGTAG TTAAAGGTAA TGGAAATGAT 
AAAGCCGAGC AAGACAAGTT TGTAAATTTT GATGAATACA AGCAATTAGT TGATTATTTC 
AGAAATAGGC TTAATCCAAA CTATTCATCT CCCACTATGC TGTTTATAAT TTCAATTACT 
GGCATGAGAG CCAGTGAAGC TTTTGGATTA GTCTGGGATG ATATTGATTT TAATAATAAC 
ACTATCAAGT GTCGCAGAAC TTGGAATTAC AGAAATAAAG TAGGTGGTTT CAAAAAGCCC 
AAAACAGATG CTGGAATAAG AGATATTGTT ATAGATGATG AAAGTATGCA ATTGCTAAAA 
GATTTTAGAG AACAGCAAAA AACATTATTT GAAAGTTTGG GTATAAAACC GATACATGAC 
TTCGTTTGTT ATCATCCTTA TAGAAAAATA ATAACTCTCT CAGCTTTGCA AAATACATTA 
GAACATGCAT TAAAAAAACT AAATATTTCT ACTCCACTTA CTGTACACGG TTTAAGGCAT 
ACTCATGCTT CTGTTCTCCT CTATCATGGA GTTGATATCA TGACTGTTTC AAAACGCCTA 
GGACATGCAA GTGTGGCTAT CACACAGCAA ACCTATATCC ATATTATAAA AGAGCTAGAA 
AATAAAGATA AGGATAAAAT AATTGAGCTA CTAATGGAGT TATAA
 
Protein sequence
MATYQKRGKT WQYSISRTKQ GLPRLTKGGF STKSDAQAEA MDIESKLKKG FIVDPIKQEI 
SEYFKDWMEL YKKNAIDEMT YKGYEQTLKY LKTYMPNVLI SEITASSYQR ALNKFAETHA 
KASTKGFHTR VRASIQPLIE EGRLQKDFTT RAVVKGNGND KAEQDKFVNF DEYKQLVDYF 
RNRLNPNYSS PTMLFIISIT GMRASEAFGL VWDDIDFNNN TIKCRRTWNY RNKVGGFKKP 
KTDAGIRDIV IDDESMQLLK DFREQQKTLF ESLGIKPIHD FVCYHPYRKI ITLSALQNTL 
EHALKKLNIS TPLTVHGLRH THASVLLYHG VDIMTVSKRL GHASVAITQQ TYIHIIKELE 
NKDKDKIIEL LMEL