Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1003 |
Symbol | deoD |
ID | 4432771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 944171 |
End bp | 944875 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639666753 |
Product | purine nucleoside phosphorylase |
Protein accession | YP_808964 |
Protein GI | 116511748 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0813] Purine-nucleoside phosphorylase |
TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00510571 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACAC CACATATCGA AGCTCAAAAA GGCGAAATCG CAGATAAAAT TCTCTTACCA GGAGATCCAC TTCGCGCAAA ATTTATCGCA GAAAACTTCC TTGAAGATGC TGTGCAATTT AACCAAGTTC GCGGAATGCT TGGCTTTACT GGAACTTACA AAGGCCACCG TGTCTCTGTC ATGGGAACAG GAATGGGAAT TCCTTCAATC TCAATCTATG CTAATGAATT GATTACGGAA TATGGCGTTA AAAGATTAAT TCGTGTTGGG ACTGCTGGTT CTGTAAATGA AGATGTTCAT ATTCGCGACC TTGTCATTGG CCAGGCAGCA GCAACAACTT CAGCCATTGT CCGTCATGAT TTTCCTGATT TTGATTTCCC GCAAATTGCT GATTTTGATT TGCTTGATAA GGCTTATCAT ATTGCAAAAG ACCTCGGAAT TACAACTCAC GTTGGAAATA TTCTCAGCTC TGATTTGTTC TATGGTGGAC CAGATGCAGT TAAAGTTGGA AAACTCGGTG TGAAGGCTGT CGAAATGGAA GCAGCTGGTC TTTATTATCT TGGGGCAAAA TATAAAGTGC AAACTTTGGG AATTATGACA ATTTCTGACC ATATTTTGAC AGGAGAATCA ACAACGTCTG AAGAACGTCA ATTGACATTT ACAGATATGA TGAAAGTTGG TTTGGAAACT TTGATTGCTG AATAA
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Protein sequence | MPTPHIEAQK GEIADKILLP GDPLRAKFIA ENFLEDAVQF NQVRGMLGFT GTYKGHRVSV MGTGMGIPSI SIYANELITE YGVKRLIRVG TAGSVNEDVH IRDLVIGQAA ATTSAIVRHD FPDFDFPQIA DFDLLDKAYH IAKDLGITTH VGNILSSDLF YGGPDAVKVG KLGVKAVEME AAGLYYLGAK YKVQTLGIMT ISDHILTGES TTSEERQLTF TDMMKVGLET LIAE
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