Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0993 |
Symbol | |
ID | 4432531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 935041 |
End bp | 935880 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639666745 |
Product | transposase |
Protein accession | YP_808956 |
Protein GI | 116511740 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.078636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAA CCATACAAAC TTTAGCACTC AATGTCAGAC TAAGCTGTCA ACTCCTTGAT GTTCCTGAAT CAAGTTATTA TCAACGGATT AACCGACATC CATCTAAAAC TCAATTAAGG AGACAATACC TGTCACTCAA AATTTCTCAA CTCTTCAATG CTAACCGAGG AATCTATGGT GCTCCTAAAA TTCATCATCT TCTACTTAAA CAAGGGGAAA AAGTCGGGTT AAAACTGGTA CAGAAGCTAA TGAAGCAACT TCAACTCAAG TCTGTAGTCA TTAAGAAATT TAAGCCTGGA TACTCACTAA GTGATCACAT CAATCGAAAA AATCTCATAC AGACTGAACC TACAAAGAAG AATAAGGTTT GGTCAACCGA CCTTACTTAT ATTCCTACTC AACAAGGATG GGCTTATCTC TCAACCATTA TGGATCGTTA TACTAAAAAA GTCATTGCTT GGGATTTGGG CAATCGAATG ACTGTAGAAT TAGTGCAAAG AACTTTAAAT AAGGCCATTA AATCACAAGA CTATCCAGAA GCTGTTATTC TTCATTCTGA CCAAGGAAGC CAGTATACGA GTCTAGAGTA TGAAGAGTTT CTTAAGTATT ATGGGATGAC TCACTCTTTC AGTCGAAGGG GATACCCTTA TCATAATGCC AGTCTTGAAT CTTGGCATGG ACATTTAAAA AGAGAGTGGG TGTATCAATT TAAATATAAG AACTTTGAAG AAGCCTATCA GAGTATTTTC TGGTACATCG AAGCCTTTTA TAATTCAAAA CGAATCCATC AAAGTTTAGG GTATCTTACA CCTAATCAAT TTGAAAAGGT AAGTGCTTAA
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Protein sequence | MAQTIQTLAL NVRLSCQLLD VPESSYYQRI NRHPSKTQLR RQYLSLKISQ LFNANRGIYG APKIHHLLLK QGEKVGLKLV QKLMKQLQLK SVVIKKFKPG YSLSDHINRK NLIQTEPTKK NKVWSTDLTY IPTQQGWAYL STIMDRYTKK VIAWDLGNRM TVELVQRTLN KAIKSQDYPE AVILHSDQGS QYTSLEYEEF LKYYGMTHSF SRRGYPYHNA SLESWHGHLK REWVYQFKYK NFEEAYQSIF WYIEAFYNSK RIHQSLGYLT PNQFEKVSA
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