Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0607 |
Symbol | |
ID | 4433726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 558081 |
End bp | 559205 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639666383 |
Product | integrase |
Protein accession | YP_808597 |
Protein GI | 116511381 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAA AGCAACAACC CAATGGTAAA TGGAAGTTCT TTGAAAAATA TCAAGATAAG CAAGACAAAT GGAAACAAGT TTCTGTAACC AAAAATTCAG GTGGTCGTGA GGCTCAAAGT CAAGCACGAA CTGAACTTGA ACTGAAAATA GCAGAAAAAC TTTCAGAAGA AATAGAAGCT GAAGAAGCAC CAAAAACCAT AAACGAGTGT TATGCGGAAT CAAGAAAAAT TCGTCAAGCT GAATTGGCTG AATCCACATA TCTCTCAGAA ACGTATGGTT TAAAAGATTT TATAAAAAAA TTTGGACAGC GTGAAATAAT TAGCATTGAG CCAAAAGAAA TGCAAGAATA TTTATTTTCT AATAAGTATT CTAATACGAC ACGGCACACC ATAGCTTTGC GCATAGGACA TATTTTTCAA TATGCTTATT CAATGGGATT TACACATGAG AATATCATGA ACCGTATCAT ACTTCCTAAA CAAAAAAAAT CGGCTGAAAG TCTTGCCAAG TGGAAAGAAA AATTTTTCAC TATGGATGAA ATGCGAAAAT TTTTGAAGAG TTGGCGAAGT CATGCAGTAG AAAAAGATGA TTTTAAACGT GCAGACTTTG TAGAATTTTT GTTTCTAACA GGTTTGAGAA TTGGCGAAGC CTCTGGTCTT CAATGGTCAC ATGTAGATAT TTTGAAACGA GTGATTTATA TTCAATTTAG TTGGAACTGT AATCTTAAAA AGCTAGGACC AACTAAAAAT CCTCAATCAG TTCGTTATGT CACTCTAAAT GACCGTTGTC TTGAGATTCT TGAAAATTTT CGTAAAGATA AATATGGTTC AAAATTTGTA TTTGTGAAAT CAAATGGGGT TCAAATTCGT AATGCGGATA TTAACACTTA TTTGAAAATT GAGGGCGCTC GTGCCAATCT GTTTGGTAAG AATTATAAAC AGTTTTCAGC GCATATGTTG CGACATTCTC ATATTACAAT GTTAGCTTTT CTAGGAGCAC CTCAAAAGGC TGTTATGGAG CGTGTGGGGC ATATGGATGC TCGAATTACA AACGGAGTTT ACACGCATGT TCTTCCTGAA AATCGACAAG ATTTGCAGTT GAAGCTAGAG AATTTGAATT TATAA
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Protein sequence | MYKKQQPNGK WKFFEKYQDK QDKWKQVSVT KNSGGREAQS QARTELELKI AEKLSEEIEA EEAPKTINEC YAESRKIRQA ELAESTYLSE TYGLKDFIKK FGQREIISIE PKEMQEYLFS NKYSNTTRHT IALRIGHIFQ YAYSMGFTHE NIMNRIILPK QKKSAESLAK WKEKFFTMDE MRKFLKSWRS HAVEKDDFKR ADFVEFLFLT GLRIGEASGL QWSHVDILKR VIYIQFSWNC NLKKLGPTKN PQSVRYVTLN DRCLEILENF RKDKYGSKFV FVKSNGVQIR NADINTYLKI EGARANLFGK NYKQFSAHML RHSHITMLAF LGAPQKAVME RVGHMDARIT NGVYTHVLPE NRQDLQLKLE NLNL
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