| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0542 |
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| Symbol | |
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| ID | 4433660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 508551 |
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| End bp | 510422 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639666325 |
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| Product | membrane carboxypeptidase (penicillin-binding protein) |
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| Protein accession | YP_808557 |
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| Protein GI | 116511341 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.158296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGTACA GTAAAATTTC TACTAAATCT AAGAAAAATA AACAAAATAA ATGGGCAAAA
AGCGGTTCTG CTAAATCAAA ATGGTGGACA GCTGTTAAAT TATTTTTGAT TGTCTTCTTT
TCATTAATTA TCTTGGTGCT AGCTGCCGGT GGCGCTGTTT TTGTTTATTA CGCCAAGGAT
GCACCCGCTC TCAATTTAGA TAAGCTTGAA TCTACTCCTT CTCCTAAAGT TTACGACTCA
AAAGAACACC TTGTTGCAAC TTTAGGGGCA GAGCAAAGAA ATTTAGTTAA AACAGACAAT
ATTCCGGTTA TGCTGGTTAA TGCTGTTACT TCTATTGAAG ACCATCGTTT TTTCAACACA
CGTGGAATTG ACCCGATACG AATTGCCGGT GCCTTCGTCA ACAACTTAAA AGGTGGTTCT
TTAAACGGGG GTTCTACCCT TGATATGCAG TTGATTAAAC TTTCTTTTTT CTCAACAGAT
GAATCGGACC AGACTTTGAG CGTCAAAGTT CAAGAAGCTT GGATGGCTCT AAAATTGGAC
CAAAAATGGA CCAAAGAGCA AATTTTTACT GCTTATGTCA ATAAGGTAAA TATGGCAAAT
GGGTATTACG GGATGGGAAC TGCTGCGCAA GCCTATTACG GAAAAGATTT AACAGAACTT
TCAATTGCTC AACTGGCTCT TCTTGCCGGA ATGCCTCAAG CTCCTAATAC TTATAACCCT
TACACTAATG CAACTTCTGT TAAATGGCGT CGTGACATGG TTATTCGCTC AATGCGTCGT
TATAATAAAA TTACGGCTGA AGAAGAGAAA TCGGCGCTAG CTACTCCAAT TGATGATGGG
CTTCAACCTT TGCAACAAAG CGTTACGATT CCTAGTTATG CTGATAACTT CCTCAAACAA
GCTATAGCAC AAGCCAAGAC CTTAGCTGGT AATGATATTT TAAACGAAGG GGTTAAAATT
TATACAATCC TTGATACTAC AGCACAACAA AATCTATATA ATATTGTTAA TAGCGGTAAT
TATATTACCT ACCCAGATGA TACACTGCAA GTAGCTTCAA CGGTCACTGA TGTTAAAACT
GGCGCTGTAA TCGCACAAAT CGGTGGACGT AATCAACCAA CCGATGTCAC TTTTGGTTTC
AATCAGGCGG TTCAAACAGA CCGAGATTGG GGTTCAACGA TGAAACCAAT TGTTGACTAT
GGCCCCGCTT TTGAAAATAA TATCTATACC TCAACGAATG ATTATGTTTC TGACTCCCCA
ACGACTTATC CAAACGGAAC GCCTTTGAAA AACTGGGATA ATACCTATTT TGGTTCAATG
ACTGTTAAGA GTGCATTGGC CCTTTCCAGA AATATTCCAG CTGTTAAAAC TTTAATTAAT
GTTGGTTTAG ATAATTCTAG TAAATTTGTG GATGGTTTAG GTATTAATTT GAACCCGCTG
CAATACTCCA ATGCTATCTC TAGTAATACT GATACAAAAA ATGGTGGGGC AAGTTCTGAG
AAAATGGCTG CGGCTTACGC TGCTTTCTCA AATGGTGGTA TCTACACTAA ACCTTACTAT
GTTTCTAAAG TTGTTTTCCC CGACGGGCGA ACAGTTGAAT ACAAACCAGT TCGTTCACGG
GCAATGCAAG CTTCAACAGC TTATATTATG ACTAATATTC TCCAAAGTGT TTTAACATTA
CCACTTTCTG AATCTGTCGG TTCATACGCT GCTGTTCCGG GCTTGCCTGC AGCTGGTAAA
ACAGGGACTT CTAATTATAC TGATAGTGAA ATGGACCAAA TTACTGAAAA ATACGGCTCA
CTCCCTGGAA TGATTTCTCC TGATGAAAAC TTCGTTGGTT ATACTCCTCA GGGTTCTGTT
GCAAAGTTTT AA
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| Protein sequence | MRYSKISTKS KKNKQNKWAK SGSAKSKWWT AVKLFLIVFF SLIILVLAAG GAVFVYYAKD
APALNLDKLE STPSPKVYDS KEHLVATLGA EQRNLVKTDN IPVMLVNAVT SIEDHRFFNT
RGIDPIRIAG AFVNNLKGGS LNGGSTLDMQ LIKLSFFSTD ESDQTLSVKV QEAWMALKLD
QKWTKEQIFT AYVNKVNMAN GYYGMGTAAQ AYYGKDLTEL SIAQLALLAG MPQAPNTYNP
YTNATSVKWR RDMVIRSMRR YNKITAEEEK SALATPIDDG LQPLQQSVTI PSYADNFLKQ
AIAQAKTLAG NDILNEGVKI YTILDTTAQQ NLYNIVNSGN YITYPDDTLQ VASTVTDVKT
GAVIAQIGGR NQPTDVTFGF NQAVQTDRDW GSTMKPIVDY GPAFENNIYT STNDYVSDSP
TTYPNGTPLK NWDNTYFGSM TVKSALALSR NIPAVKTLIN VGLDNSSKFV DGLGINLNPL
QYSNAISSNT DTKNGGASSE KMAAAYAAFS NGGIYTKPYY VSKVVFPDGR TVEYKPVRSR
AMQASTAYIM TNILQSVLTL PLSESVGSYA AVPGLPAAGK TGTSNYTDSE MDQITEKYGS
LPGMISPDEN FVGYTPQGSV AKF
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