Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0416 |
Symbol | |
ID | 4433351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 387274 |
End bp | 388092 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639666211 |
Product | transposase |
Protein accession | YP_808445 |
Protein GI | 116511229 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0878674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGTTA CAGGATTCCC TAAAGCCACT TATTATTATT GGGTTAACTG TTTTGAACGG GTAAACAAAG ATGAGCTTAT CGAAAAAGAA ATGCTTAAAA TACGTCAAGA ACATGCCAAT GCAGGTTATC GTCCAATGAG TGAATTACTT AAGCAACGTG GCTATCACGT CAACCACAAG AAGGTACAGC GCTTAATGAA GAAGCTAGGG CTTCGTGTGA CGTCTTATTG GCACAAATCA CGTAAATATA ATTCATATAA AGGAAAAGTA GGGACGGTAG CTAAAAATAA ATTGCACAGA CGATTCAGAA CTTCCATTCC TCATCAAAAA ATCACAACAG ATACGACAGA ATTCAAATAT TATGAAGATG GAATTCAGAA AAAGTGTTAT CTCAATCCTT ACATTGATTT ATTTAATAGC GAGGTGATTA GTTATCATAT CTCTAAACAC CCCTCTTATC AATCAATTGA TATTGCTCTA AATCAAGCCT TAGCTGTGAC ATCTGATTGT CCTTATCGAC GTACTTTCCA CTCAGATCAA GGATGGGGAT ACCAAATGAG AGACTATGTT TCTAAATTAA AATCTCATAG AATTTTTCAG TCTATGAGCC GTAAAGGAAA CTGTCATGAT AATTCAGTTA TGGAGAATTT CTTTGGGCTA CTTAAACAAG AAATTTACTA CGGACATATC TTCTCGTCTT TCGAAGAACT TGAACAGGTT ATTGTAATCT GGATTAGGTA CTATAATACA AAACGAATCA AACAAAAATT GAACTGGATG AGTCCAATTC AATTTCGCTT GAATTACCAA AACAATTAA
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Protein sequence | MKVTGFPKAT YYYWVNCFER VNKDELIEKE MLKIRQEHAN AGYRPMSELL KQRGYHVNHK KVQRLMKKLG LRVTSYWHKS RKYNSYKGKV GTVAKNKLHR RFRTSIPHQK ITTDTTEFKY YEDGIQKKCY LNPYIDLFNS EVISYHISKH PSYQSIDIAL NQALAVTSDC PYRRTFHSDQ GWGYQMRDYV SKLKSHRIFQ SMSRKGNCHD NSVMENFFGL LKQEIYYGHI FSSFEELEQV IVIWIRYYNT KRIKQKLNWM SPIQFRLNYQ NN
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