Gene LACR_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_0393 
Symbol 
ID4433842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp361859 
End bp362908 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content41% 
IMG OID639666188 
ProductABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
Protein accessionYP_808422 
Protein GI116511206 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAG AAAAAGTATT AGAAGTTAAA AATTTGCATG TCAATTTCCA CACCTATGCT 
GGAGATGTTA AAGCGATTCG TGATGTTTCT TTTGATTTAG AAAAAGGACA GACCCTAGCG 
ATTGTTGGTG AGTCTGGTTC TGGTAAATCA GTAACAACAA AAACTTTGAT GGGCTTGAAT 
GCGAAAAATG CGGTAATACC GCAAGGTGAA TTATTATTTA AAGGGCGTAA CCTTCTTGAT 
TTAAAAGAAG AAGAATGGCA AAAAATTCGT GGAAATGAAA TTTCAATGAT TTTCCAAGAC 
CCAATGACTT CTCTTGACCC AACCATGCGT ATTGGAAAAC AGATTGCTGA ACCTTTGTTG 
AAACACAATA AAGGCATGAG TAAAGCCGAT GCCATGAAAC GGTCCCTTGA ATTGATGCAA 
CAAGTAGGGA TTCCTGATGC CGAAGTACAT ATCAATGATT ATCCACACCA ATGGTCAGGT 
GGGATGCGTC AACGGGCGGT TATCGCCATT GCCTTGGCTG CTGACCCTGA AATATTGATT 
GCAGATGAAC CTACAACTGC GCTTGACGTT ACTATTCAAG CACAAATCAT GCACATGATG 
GCCGAATTGC AAGAGCGTAT TAATTCATCT ATTGTCTTTA TCACCCATGA TTTAGGGGTT 
GTTGCTGGAT TTGCACATAA AGTTGCAGTA ATGTATGCGG GAGAAATCGT TGAATATGGG 
ACAGTTGAAG AAATTTTCTA TAACCCACAA CATCCTTACA CTTGGGGACT TTTGGATTCA 
ATGCCAACAG TTGATTCAAG TGTAGACCGC TTGGTTTCAA TTCCAGGAAC TCCTCCTGAC 
TTGTTGAATC CGCCAAAAGG GGATGCCTTT GCGGCACGTA ATAAATTTGC CCTAGCAATT 
GACTTTGAAG AAGAACCTCC ATACTTTGAA GTTTCTCCAA CTCATTTTGC TAAAACTTGG 
CTTTTAGATC CACGAGCACC AAAAGTAACG CCTTCCGATA ATATCTTGGC ACGTTGGAAA 
CGCTGGGAAG AATTGAAAGG GGATAAATGA
 
Protein sequence
MAEEKVLEVK NLHVNFHTYA GDVKAIRDVS FDLEKGQTLA IVGESGSGKS VTTKTLMGLN 
AKNAVIPQGE LLFKGRNLLD LKEEEWQKIR GNEISMIFQD PMTSLDPTMR IGKQIAEPLL 
KHNKGMSKAD AMKRSLELMQ QVGIPDAEVH INDYPHQWSG GMRQRAVIAI ALAADPEILI 
ADEPTTALDV TIQAQIMHMM AELQERINSS IVFITHDLGV VAGFAHKVAV MYAGEIVEYG 
TVEEIFYNPQ HPYTWGLLDS MPTVDSSVDR LVSIPGTPPD LLNPPKGDAF AARNKFALAI 
DFEEEPPYFE VSPTHFAKTW LLDPRAPKVT PSDNILARWK RWEELKGDK